Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RoraP51448 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.74■□□□□ 0.27
RoraP51448 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RoraP51448 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RoraP51448 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RoraP51448 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RoraP51448 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RoraP51448 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
RoraP51448 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.73■□□□□ 0.27
RoraP51448 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RoraP51448 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RoraP51448 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RoraP51448 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.73■□□□□ 0.27
RoraP51448 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RoraP51448 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RoraP51448 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RoraP51448 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.73■□□□□ 0.27
RoraP51448 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RoraP51448 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RoraP51448 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
RoraP51448 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
RoraP51448 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RoraP51448 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RoraP51448 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.72■□□□□ 0.27
RoraP51448 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RoraP51448 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.72■□□□□ 0.27
RoraP51448 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
RoraP51448 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
RoraP51448 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RoraP51448 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RoraP51448 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.72■□□□□ 0.27
RoraP51448 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RoraP51448 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RoraP51448 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RoraP51448 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RoraP51448 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
RoraP51448 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RoraP51448 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RoraP51448 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RoraP51448 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
RoraP51448 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RoraP51448 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
RoraP51448 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
RoraP51448 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
RoraP51448 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
RoraP51448 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
RoraP51448 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
RoraP51448 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
RoraP51448 Odf3b-204ENSMUST00000227834 930 ntBASIC16.71■□□□□ 0.27
RoraP51448 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RoraP51448 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RoraP51448 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RoraP51448 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.71■□□□□ 0.26
RoraP51448 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
RoraP51448 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RoraP51448 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.7■□□□□ 0.26
RoraP51448 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RoraP51448 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
RoraP51448 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RoraP51448 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
RoraP51448 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.7■□□□□ 0.26
RoraP51448 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RoraP51448 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.7■□□□□ 0.26
RoraP51448 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RoraP51448 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.7■□□□□ 0.26
RoraP51448 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RoraP51448 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RoraP51448 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RoraP51448 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RoraP51448 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RoraP51448 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.7■□□□□ 0.26
RoraP51448 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.7■□□□□ 0.26
RoraP51448 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RoraP51448 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.7■□□□□ 0.26
RoraP51448 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RoraP51448 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RoraP51448 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RoraP51448 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RoraP51448 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RoraP51448 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RoraP51448 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.69■□□□□ 0.26
RoraP51448 Timm23-208ENSMUST00000226683 750 ntBASIC16.69■□□□□ 0.26
RoraP51448 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RoraP51448 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RoraP51448 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
RoraP51448 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RoraP51448 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RoraP51448 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RoraP51448 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RoraP51448 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.69■□□□□ 0.26
RoraP51448 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RoraP51448 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RoraP51448 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RoraP51448 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
RoraP51448 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RoraP51448 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RoraP51448 Gm11643-201ENSMUST00000119578 864 ntBASIC16.68■□□□□ 0.26
RoraP51448 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RoraP51448 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.68■□□□□ 0.26
RoraP51448 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms