Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx2-1P50220 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC14.7□□□□□ -0.06
Nkx2-1P50220 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC14.7□□□□□ -0.06
Nkx2-1P50220 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx2-1P50220 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC14.7□□□□□ -0.06
Nkx2-1P50220 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC14.7□□□□□ -0.06
Nkx2-1P50220 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC14.7□□□□□ -0.06
Nkx2-1P50220 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Nkx2-1P50220 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx2-1P50220 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx2-1P50220 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx2-1P50220 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nkx2-1P50220 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-1P50220 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-1P50220 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.69□□□□□ -0.06
Nkx2-1P50220 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-1P50220 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Nkx2-1P50220 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-1P50220 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-1P50220 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Nkx2-1P50220 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-1P50220 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Nkx2-1P50220 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC14.69□□□□□ -0.06
Nkx2-1P50220 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Nkx2-1P50220 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-1P50220 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-1P50220 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-1P50220 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-1P50220 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-1P50220 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nkx2-1P50220 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-1P50220 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-1P50220 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-1P50220 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Nkx2-1P50220 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-1P50220 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-1P50220 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-1P50220 Gm43017-201ENSMUST00000198296 752 ntBASIC14.68□□□□□ -0.06
Nkx2-1P50220 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC14.68□□□□□ -0.06
Nkx2-1P50220 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-1P50220 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-1P50220 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-1P50220 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-1P50220 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-1P50220 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-1P50220 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nkx2-1P50220 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Nkx2-1P50220 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-1P50220 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-1P50220 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.67□□□□□ -0.06
Nkx2-1P50220 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-1P50220 Gm26971-201ENSMUST00000182423 1072 ntBASIC14.67□□□□□ -0.06
Nkx2-1P50220 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
Nkx2-1P50220 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC14.67□□□□□ -0.06
Nkx2-1P50220 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Nkx2-1P50220 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC14.67□□□□□ -0.06
Nkx2-1P50220 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-1P50220 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-1P50220 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-1P50220 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-1P50220 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Nkx2-1P50220 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nkx2-1P50220 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-1P50220 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC14.66□□□□□ -0.06
Nkx2-1P50220 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-1P50220 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-1P50220 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-1P50220 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-1P50220 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-1P50220 Gm38205-201ENSMUST00000192243 258 ntBASIC14.66□□□□□ -0.06
Nkx2-1P50220 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-1P50220 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-1P50220 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-1P50220 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-1P50220 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-1P50220 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-1P50220 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-1P50220 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.66□□□□□ -0.06
Nkx2-1P50220 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-1P50220 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-1P50220 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-1P50220 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-1P50220 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nkx2-1P50220 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-1P50220 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-1P50220 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-1P50220 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-1P50220 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-1P50220 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-1P50220 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-1P50220 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-1P50220 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.65□□□□□ -0.06
Nkx2-1P50220 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-1P50220 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Nkx2-1P50220 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC14.65□□□□□ -0.06
Nkx2-1P50220 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-1P50220 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC14.65□□□□□ -0.06
Nkx2-1P50220 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-1P50220 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nkx2-1P50220 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms