Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.97■□□□□ 0.79
Brca1P48754 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC19.97■□□□□ 0.79
Brca1P48754 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Brca1P48754 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.97■□□□□ 0.79
Brca1P48754 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Brca1P48754 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Brca1P48754 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.97■□□□□ 0.79
Brca1P48754 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Brca1P48754 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Brca1P48754 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Brca1P48754 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
Brca1P48754 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
Brca1P48754 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
Brca1P48754 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Brca1P48754 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Brca1P48754 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Brca1P48754 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Brca1P48754 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Brca1P48754 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.96■□□□□ 0.79
Brca1P48754 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.96■□□□□ 0.79
Brca1P48754 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Brca1P48754 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
Brca1P48754 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Brca1P48754 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC19.96■□□□□ 0.79
Brca1P48754 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Brca1P48754 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Brca1P48754 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Brca1P48754 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
Brca1P48754 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Brca1P48754 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Brca1P48754 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Brca1P48754 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
Brca1P48754 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Brca1P48754 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Brca1P48754 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Brca1P48754 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Brca1P48754 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Brca1P48754 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Brca1P48754 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC19.95■□□□□ 0.78
Brca1P48754 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Brca1P48754 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Brca1P48754 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Brca1P48754 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Brca1P48754 Mir8112-201ENSMUST00000184382 131 ntBASIC19.94■□□□□ 0.78
Brca1P48754 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Brca1P48754 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Brca1P48754 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Brca1P48754 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Brca1P48754 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Brca1P48754 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Brca1P48754 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.94■□□□□ 0.78
Brca1P48754 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Brca1P48754 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Brca1P48754 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Brca1P48754 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
Brca1P48754 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Brca1P48754 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC19.93■□□□□ 0.78
Brca1P48754 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Brca1P48754 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.93■□□□□ 0.78
Brca1P48754 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC19.93■□□□□ 0.78
Brca1P48754 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Brca1P48754 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.93■□□□□ 0.78
Brca1P48754 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Brca1P48754 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Brca1P48754 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Brca1P48754 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.93■□□□□ 0.78
Brca1P48754 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Brca1P48754 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Brca1P48754 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Brca1P48754 Mir770-201ENSMUST00000103252 94 ntBASIC19.92■□□□□ 0.78
Brca1P48754 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
Brca1P48754 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Brca1P48754 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Brca1P48754 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC19.92■□□□□ 0.78
Brca1P48754 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC19.92■□□□□ 0.78
Brca1P48754 Gm28659-201ENSMUST00000188013 759 ntBASIC19.92■□□□□ 0.78
Brca1P48754 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Brca1P48754 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Brca1P48754 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Brca1P48754 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Brca1P48754 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Brca1P48754 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Brca1P48754 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Brca1P48754 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.92■□□□□ 0.78
Brca1P48754 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Brca1P48754 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Brca1P48754 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Brca1P48754 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Brca1P48754 AC120002.2-201ENSMUST00000220205 773 ntBASIC19.92■□□□□ 0.78
Brca1P48754 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Brca1P48754 Actl10-202ENSMUST00000226583 1501 ntBASIC19.92■□□□□ 0.78
Brca1P48754 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Brca1P48754 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Brca1P48754 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Brca1P48754 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Brca1P48754 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Brca1P48754 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Brca1P48754 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Brca1P48754 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Brca1P48754 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms