Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cdx2P43241 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdx2P43241 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdx2P43241 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdx2P43241 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cdx2P43241 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdx2P43241 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cdx2P43241 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cdx2P43241 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdx2P43241 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdx2P43241 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdx2P43241 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cdx2P43241 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdx2P43241 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.82■□□□□ 0.28
Cdx2P43241 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdx2P43241 Gm9013-201ENSMUST00000132939 882 ntBASIC16.82■□□□□ 0.28
Cdx2P43241 Gm17971-201ENSMUST00000190239 806 ntBASIC16.82■□□□□ 0.28
Cdx2P43241 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cdx2P43241 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Cdx2P43241 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdx2P43241 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdx2P43241 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdx2P43241 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cdx2P43241 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Cdx2P43241 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdx2P43241 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdx2P43241 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdx2P43241 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdx2P43241 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.81■□□□□ 0.28
Cdx2P43241 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cdx2P43241 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.81■□□□□ 0.28
Cdx2P43241 Gm29518-201ENSMUST00000190858 372 ntBASIC16.81■□□□□ 0.28
Cdx2P43241 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.81■□□□□ 0.28
Cdx2P43241 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdx2P43241 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdx2P43241 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdx2P43241 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdx2P43241 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.81■□□□□ 0.28
Cdx2P43241 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdx2P43241 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdx2P43241 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Cdx2P43241 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Cdx2P43241 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdx2P43241 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdx2P43241 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdx2P43241 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdx2P43241 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdx2P43241 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cdx2P43241 Gm29791-202ENSMUST00000207888 369 ntBASIC16.8■□□□□ 0.28
Cdx2P43241 Gm7213-201ENSMUST00000215977 950 ntBASIC16.8■□□□□ 0.28
Cdx2P43241 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdx2P43241 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Cdx2P43241 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Cdx2P43241 Tgds-204ENSMUST00000228543 1594 ntBASIC16.8■□□□□ 0.28
Cdx2P43241 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Cdx2P43241 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Cdx2P43241 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdx2P43241 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Cdx2P43241 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Cdx2P43241 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdx2P43241 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.79■□□□□ 0.28
Cdx2P43241 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdx2P43241 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cdx2P43241 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdx2P43241 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdx2P43241 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
Cdx2P43241 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Cdx2P43241 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.79■□□□□ 0.28
Cdx2P43241 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdx2P43241 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Cdx2P43241 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cdx2P43241 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdx2P43241 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdx2P43241 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdx2P43241 Iqck-206ENSMUST00000208658 2891 ntBASIC16.78■□□□□ 0.28
Cdx2P43241 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdx2P43241 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cdx2P43241 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.78■□□□□ 0.28
Cdx2P43241 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cdx2P43241 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdx2P43241 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.78■□□□□ 0.28
Cdx2P43241 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.78■□□□□ 0.28
Cdx2P43241 Gm9731-201ENSMUST00000209480 747 ntBASIC16.78■□□□□ 0.28
Cdx2P43241 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdx2P43241 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.78■□□□□ 0.28
Cdx2P43241 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdx2P43241 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdx2P43241 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdx2P43241 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Cdx2P43241 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cdx2P43241 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Cdx2P43241 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdx2P43241 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdx2P43241 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.77■□□□□ 0.28
Cdx2P43241 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.77■□□□□ 0.28
Cdx2P43241 Gm17807-201ENSMUST00000186869 298 ntBASIC16.77■□□□□ 0.28
Cdx2P43241 Gm17808-201ENSMUST00000200859 894 ntBASIC16.77■□□□□ 0.28
Cdx2P43241 Il3ra-202ENSMUST00000223589 738 ntBASIC16.77■□□□□ 0.28
Cdx2P43241 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdx2P43241 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms