Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Fen1P39749 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Fen1P39749 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.82■□□□□ 0.44
Fen1P39749 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fen1P39749 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fen1P39749 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fen1P39749 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fen1P39749 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.82■□□□□ 0.44
Fen1P39749 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fen1P39749 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Fen1P39749 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fen1P39749 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.82■□□□□ 0.44
Fen1P39749 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fen1P39749 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Fen1P39749 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fen1P39749 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Fen1P39749 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fen1P39749 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Fen1P39749 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Fen1P39749 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.82■□□□□ 0.44
Fen1P39749 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.81■□□□□ 0.44
Fen1P39749 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Fen1P39749 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Fen1P39749 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.81■□□□□ 0.44
Fen1P39749 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Fen1P39749 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Fen1P39749 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.81■□□□□ 0.44
Fen1P39749 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Fen1P39749 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Fen1P39749 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Fen1P39749 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Fen1P39749 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Fen1P39749 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Fen1P39749 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Fen1P39749 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Fen1P39749 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Fen1P39749 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Fen1P39749 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Fen1P39749 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Fen1P39749 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.8■□□□□ 0.44
Fen1P39749 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Fen1P39749 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Fen1P39749 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Fen1P39749 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.8■□□□□ 0.44
Fen1P39749 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Fen1P39749 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Fen1P39749 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.8■□□□□ 0.44
Fen1P39749 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.8■□□□□ 0.44
Fen1P39749 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Fen1P39749 Gm9988-201ENSMUST00000069786 435 ntBASIC17.8■□□□□ 0.44
Fen1P39749 Gm5874-201ENSMUST00000096101 508 ntBASIC17.8■□□□□ 0.44
Fen1P39749 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Fen1P39749 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Fen1P39749 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Fen1P39749 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Fen1P39749 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Fen1P39749 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Fen1P39749 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.79■□□□□ 0.44
Fen1P39749 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Fen1P39749 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.79■□□□□ 0.44
Fen1P39749 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Fen1P39749 Gm43060-201ENSMUST00000200621 289 ntBASIC17.79■□□□□ 0.44
Fen1P39749 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.79■□□□□ 0.44
Fen1P39749 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Fen1P39749 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Fen1P39749 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Fen1P39749 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.78■□□□□ 0.44
Fen1P39749 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Fen1P39749 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Fen1P39749 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Fen1P39749 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Fen1P39749 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.78■□□□□ 0.44
Fen1P39749 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Fen1P39749 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Fen1P39749 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Fen1P39749 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.78■□□□□ 0.44
Fen1P39749 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.78■□□□□ 0.44
Fen1P39749 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Fen1P39749 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Fen1P39749 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Fen1P39749 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Fen1P39749 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Fen1P39749 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Fen1P39749 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Fen1P39749 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Fen1P39749 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Fen1P39749 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Fen1P39749 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Fen1P39749 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Fen1P39749 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Fen1P39749 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Fen1P39749 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Fen1P39749 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.77■□□□□ 0.44
Fen1P39749 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Fen1P39749 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Fen1P39749 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Fen1P39749 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Fen1P39749 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Fen1P39749 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.77■□□□□ 0.44
Fen1P39749 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms