Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RetP35546 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RetP35546 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RetP35546 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RetP35546 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RetP35546 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RetP35546 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RetP35546 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.57■□□□□ 0.24
RetP35546 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RetP35546 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RetP35546 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RetP35546 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.57■□□□□ 0.24
RetP35546 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.57■□□□□ 0.24
RetP35546 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.57■□□□□ 0.24
RetP35546 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.57■□□□□ 0.24
RetP35546 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RetP35546 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RetP35546 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RetP35546 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RetP35546 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RetP35546 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.57■□□□□ 0.24
RetP35546 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.57■□□□□ 0.24
RetP35546 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RetP35546 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RetP35546 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RetP35546 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RetP35546 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.56■□□□□ 0.24
RetP35546 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RetP35546 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RetP35546 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RetP35546 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RetP35546 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RetP35546 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
RetP35546 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.56■□□□□ 0.24
RetP35546 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.56■□□□□ 0.24
RetP35546 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
RetP35546 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
RetP35546 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.56■□□□□ 0.24
RetP35546 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.56■□□□□ 0.24
RetP35546 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RetP35546 Gm9987-201ENSMUST00000069768 567 ntBASIC16.56■□□□□ 0.24
RetP35546 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RetP35546 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RetP35546 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RetP35546 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RetP35546 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.56■□□□□ 0.24
RetP35546 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RetP35546 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
RetP35546 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.56■□□□□ 0.24
RetP35546 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RetP35546 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RetP35546 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
RetP35546 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RetP35546 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RetP35546 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RetP35546 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RetP35546 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RetP35546 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
RetP35546 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RetP35546 Gm13158-201ENSMUST00000122007 736 ntBASIC16.55■□□□□ 0.24
RetP35546 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.55■□□□□ 0.24
RetP35546 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.55■□□□□ 0.24
RetP35546 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.55■□□□□ 0.24
RetP35546 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RetP35546 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RetP35546 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RetP35546 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.55■□□□□ 0.24
RetP35546 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RetP35546 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
RetP35546 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RetP35546 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RetP35546 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RetP35546 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RetP35546 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RetP35546 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RetP35546 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RetP35546 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
RetP35546 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RetP35546 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
RetP35546 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RetP35546 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RetP35546 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.54■□□□□ 0.24
RetP35546 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.54■□□□□ 0.24
RetP35546 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RetP35546 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.54■□□□□ 0.24
RetP35546 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
RetP35546 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RetP35546 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RetP35546 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RetP35546 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
RetP35546 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RetP35546 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RetP35546 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RetP35546 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.54■□□□□ 0.24
RetP35546 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RetP35546 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.53■□□□□ 0.24
RetP35546 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RetP35546 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
RetP35546 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RetP35546 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms