Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a1P31648 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Slc6a1P31648 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a1P31648 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.23■□□□□ 0.03
Slc6a1P31648 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.23■□□□□ 0.03
Slc6a1P31648 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Slc6a1P31648 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a1P31648 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a1P31648 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a1P31648 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Slc6a1P31648 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a1P31648 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a1P31648 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a1P31648 Gm11421-201ENSMUST00000122124 294 ntBASIC15.23■□□□□ 0.03
Slc6a1P31648 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC15.23■□□□□ 0.03
Slc6a1P31648 AC137127.1-201ENSMUST00000213466 1078 ntBASIC15.23■□□□□ 0.03
Slc6a1P31648 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Slc6a1P31648 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a1P31648 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a1P31648 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a1P31648 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a1P31648 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a1P31648 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Slc6a1P31648 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a1P31648 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a1P31648 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a1P31648 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a1P31648 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a1P31648 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a1P31648 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a1P31648 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Slc6a1P31648 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Slc6a1P31648 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Slc6a1P31648 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc6a1P31648 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc6a1P31648 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc6a1P31648 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Slc6a1P31648 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC15.22■□□□□ 0.03
Slc6a1P31648 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc6a1P31648 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc6a1P31648 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Slc6a1P31648 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Slc6a1P31648 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc6a1P31648 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc6a1P31648 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc6a1P31648 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc6a1P31648 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc6a1P31648 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc6a1P31648 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc6a1P31648 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Slc6a1P31648 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc6a1P31648 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc6a1P31648 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc6a1P31648 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Slc6a1P31648 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc6a1P31648 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc6a1P31648 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.21■□□□□ 0.03
Slc6a1P31648 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc6a1P31648 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc6a1P31648 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC15.21■□□□□ 0.03
Slc6a1P31648 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc6a1P31648 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Slc6a1P31648 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Slc6a1P31648 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Slc6a1P31648 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Slc6a1P31648 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Slc6a1P31648 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc6a1P31648 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc6a1P31648 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.2■□□□□ 0.02
Slc6a1P31648 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Slc6a1P31648 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Slc6a1P31648 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc6a1P31648 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.2■□□□□ 0.02
Slc6a1P31648 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc6a1P31648 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC15.2■□□□□ 0.02
Slc6a1P31648 Gm37805-201ENSMUST00000192612 1094 ntBASIC15.2■□□□□ 0.02
Slc6a1P31648 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Slc6a1P31648 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Slc6a1P31648 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Slc6a1P31648 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc6a1P31648 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc6a1P31648 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Slc6a1P31648 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Slc6a1P31648 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc6a1P31648 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Slc6a1P31648 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc6a1P31648 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a1P31648 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a1P31648 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a1P31648 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Slc6a1P31648 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a1P31648 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a1P31648 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a1P31648 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.19■□□□□ 0.02
Slc6a1P31648 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a1P31648 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a1P31648 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.19■□□□□ 0.02
Slc6a1P31648 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a1P31648 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc6a1P31648 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms