Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PdgfbP31240 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PdgfbP31240 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PdgfbP31240 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PdgfbP31240 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.76■□□□□ 0.43
PdgfbP31240 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PdgfbP31240 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.76■□□□□ 0.43
PdgfbP31240 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PdgfbP31240 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
PdgfbP31240 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PdgfbP31240 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PdgfbP31240 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PdgfbP31240 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
PdgfbP31240 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PdgfbP31240 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PdgfbP31240 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PdgfbP31240 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PdgfbP31240 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PdgfbP31240 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PdgfbP31240 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PdgfbP31240 Olfr129-201ENSMUST00000122318 993 ntBASIC17.75■□□□□ 0.43
PdgfbP31240 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PdgfbP31240 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PdgfbP31240 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.75■□□□□ 0.43
PdgfbP31240 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PdgfbP31240 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PdgfbP31240 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PdgfbP31240 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PdgfbP31240 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PdgfbP31240 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PdgfbP31240 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PdgfbP31240 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PdgfbP31240 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PdgfbP31240 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PdgfbP31240 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PdgfbP31240 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
PdgfbP31240 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
PdgfbP31240 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.74■□□□□ 0.43
PdgfbP31240 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.74■□□□□ 0.43
PdgfbP31240 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PdgfbP31240 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PdgfbP31240 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.74■□□□□ 0.43
PdgfbP31240 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PdgfbP31240 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PdgfbP31240 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PdgfbP31240 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
PdgfbP31240 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.73■□□□□ 0.43
PdgfbP31240 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.73■□□□□ 0.43
PdgfbP31240 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PdgfbP31240 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PdgfbP31240 Birc2-201ENSMUST00000054878 378 ntBASIC17.73■□□□□ 0.43
PdgfbP31240 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PdgfbP31240 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
PdgfbP31240 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PdgfbP31240 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PdgfbP31240 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PdgfbP31240 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PdgfbP31240 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
PdgfbP31240 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.72■□□□□ 0.43
PdgfbP31240 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PdgfbP31240 Gm28659-201ENSMUST00000188013 759 ntBASIC17.72■□□□□ 0.43
PdgfbP31240 Gm37722-201ENSMUST00000193757 208 ntBASIC17.72■□□□□ 0.43
PdgfbP31240 Gm5864-201ENSMUST00000202263 970 ntBASIC17.72■□□□□ 0.43
PdgfbP31240 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PdgfbP31240 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.72■□□□□ 0.43
PdgfbP31240 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PdgfbP31240 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PdgfbP31240 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PdgfbP31240 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PdgfbP31240 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PdgfbP31240 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PdgfbP31240 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PdgfbP31240 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PdgfbP31240 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.71■□□□□ 0.43
PdgfbP31240 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PdgfbP31240 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.71■□□□□ 0.43
PdgfbP31240 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PdgfbP31240 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.71■□□□□ 0.43
PdgfbP31240 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PdgfbP31240 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PdgfbP31240 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PdgfbP31240 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
PdgfbP31240 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PdgfbP31240 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PdgfbP31240 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
PdgfbP31240 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PdgfbP31240 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PdgfbP31240 Notumos-201ENSMUST00000151998 2659 ntBASIC17.7■□□□□ 0.42
PdgfbP31240 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
PdgfbP31240 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PdgfbP31240 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PdgfbP31240 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.7■□□□□ 0.42
PdgfbP31240 Gm37025-201ENSMUST00000195159 829 ntBASIC17.7■□□□□ 0.42
PdgfbP31240 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PdgfbP31240 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.7■□□□□ 0.42
PdgfbP31240 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.7■□□□□ 0.42
PdgfbP31240 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PdgfbP31240 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PdgfbP31240 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.7■□□□□ 0.42
PdgfbP31240 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms