Protein–RNA interactions for Protein: P30882

Ccl5, C-C motif chemokine 5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl5P30882 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccl5P30882 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC18.33■□□□□ 0.52
Ccl5P30882 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccl5P30882 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.33■□□□□ 0.52
Ccl5P30882 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ccl5P30882 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Ccl5P30882 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccl5P30882 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccl5P30882 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccl5P30882 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC18.32■□□□□ 0.52
Ccl5P30882 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.32■□□□□ 0.52
Ccl5P30882 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccl5P30882 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC18.32■□□□□ 0.52
Ccl5P30882 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ccl5P30882 Gm2651-201ENSMUST00000203560 838 ntBASIC18.32■□□□□ 0.52
Ccl5P30882 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.32■□□□□ 0.52
Ccl5P30882 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccl5P30882 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccl5P30882 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.32■□□□□ 0.52
Ccl5P30882 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ccl5P30882 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Ccl5P30882 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccl5P30882 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccl5P30882 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
Ccl5P30882 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.31■□□□□ 0.52
Ccl5P30882 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ccl5P30882 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ccl5P30882 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccl5P30882 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccl5P30882 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Ccl5P30882 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.31■□□□□ 0.52
Ccl5P30882 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.31■□□□□ 0.52
Ccl5P30882 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.31■□□□□ 0.52
Ccl5P30882 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Ccl5P30882 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.31■□□□□ 0.52
Ccl5P30882 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ccl5P30882 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccl5P30882 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ccl5P30882 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccl5P30882 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccl5P30882 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccl5P30882 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccl5P30882 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccl5P30882 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Ccl5P30882 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Ccl5P30882 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ccl5P30882 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC18.3■□□□□ 0.52
Ccl5P30882 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.3■□□□□ 0.52
Ccl5P30882 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC18.3■□□□□ 0.52
Ccl5P30882 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Ccl5P30882 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccl5P30882 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccl5P30882 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccl5P30882 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccl5P30882 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccl5P30882 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccl5P30882 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccl5P30882 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccl5P30882 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccl5P30882 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ccl5P30882 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.29■□□□□ 0.52
Ccl5P30882 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ccl5P30882 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ccl5P30882 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Ccl5P30882 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ccl5P30882 Gm2213-201ENSMUST00000197485 688 ntBASIC18.29■□□□□ 0.52
Ccl5P30882 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Ccl5P30882 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccl5P30882 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.29■□□□□ 0.52
Ccl5P30882 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccl5P30882 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
Ccl5P30882 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Ccl5P30882 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ccl5P30882 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccl5P30882 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccl5P30882 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccl5P30882 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.28■□□□□ 0.52
Ccl5P30882 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC18.28■□□□□ 0.52
Ccl5P30882 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ccl5P30882 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccl5P30882 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC18.28■□□□□ 0.52
Ccl5P30882 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccl5P30882 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ccl5P30882 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccl5P30882 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccl5P30882 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccl5P30882 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Ccl5P30882 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccl5P30882 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccl5P30882 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ccl5P30882 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccl5P30882 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Ccl5P30882 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccl5P30882 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ccl5P30882 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ccl5P30882 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ccl5P30882 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ccl5P30882 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccl5P30882 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccl5P30882 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms