Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nedd8P29595 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Nedd8P29595 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nedd8P29595 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nedd8P29595 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nedd8P29595 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nedd8P29595 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nedd8P29595 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nedd8P29595 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC16.43■□□□□ 0.22
Nedd8P29595 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nedd8P29595 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nedd8P29595 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.43■□□□□ 0.22
Nedd8P29595 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.43■□□□□ 0.22
Nedd8P29595 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.43■□□□□ 0.22
Nedd8P29595 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nedd8P29595 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Nedd8P29595 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nedd8P29595 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nedd8P29595 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nedd8P29595 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nedd8P29595 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nedd8P29595 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nedd8P29595 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nedd8P29595 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Nedd8P29595 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Nedd8P29595 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nedd8P29595 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nedd8P29595 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Nedd8P29595 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nedd8P29595 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nedd8P29595 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Nedd8P29595 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nedd8P29595 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Nedd8P29595 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Nedd8P29595 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nedd8P29595 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nedd8P29595 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nedd8P29595 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.42■□□□□ 0.22
Nedd8P29595 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nedd8P29595 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nedd8P29595 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nedd8P29595 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nedd8P29595 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Nedd8P29595 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nedd8P29595 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Nedd8P29595 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nedd8P29595 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nedd8P29595 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nedd8P29595 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nedd8P29595 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nedd8P29595 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.41■□□□□ 0.22
Nedd8P29595 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nedd8P29595 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nedd8P29595 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nedd8P29595 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Nedd8P29595 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nedd8P29595 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nedd8P29595 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nedd8P29595 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nedd8P29595 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nedd8P29595 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nedd8P29595 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.41■□□□□ 0.22
Nedd8P29595 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nedd8P29595 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nedd8P29595 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nedd8P29595 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nedd8P29595 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nedd8P29595 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nedd8P29595 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nedd8P29595 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nedd8P29595 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nedd8P29595 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Nedd8P29595 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nedd8P29595 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nedd8P29595 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nedd8P29595 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nedd8P29595 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nedd8P29595 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nedd8P29595 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nedd8P29595 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nedd8P29595 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nedd8P29595 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nedd8P29595 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Nedd8P29595 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nedd8P29595 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nedd8P29595 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nedd8P29595 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.39■□□□□ 0.21
Nedd8P29595 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.39■□□□□ 0.21
Nedd8P29595 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.39■□□□□ 0.21
Nedd8P29595 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Nedd8P29595 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
Nedd8P29595 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.39■□□□□ 0.21
Nedd8P29595 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Nedd8P29595 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nedd8P29595 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC16.39■□□□□ 0.21
Nedd8P29595 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC16.39■□□□□ 0.21
Nedd8P29595 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.39■□□□□ 0.21
Nedd8P29595 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nedd8P29595 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.39■□□□□ 0.21
Nedd8P29595 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms