Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Mmp3P28862 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.99■□□□□ 0.63
Mmp3P28862 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Mmp3P28862 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Mmp3P28862 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp3P28862 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp3P28862 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp3P28862 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp3P28862 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp3P28862 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp3P28862 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp3P28862 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp3P28862 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Mmp3P28862 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.98■□□□□ 0.63
Mmp3P28862 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp3P28862 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp3P28862 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp3P28862 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp3P28862 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp3P28862 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.98■□□□□ 0.63
Mmp3P28862 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp3P28862 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp3P28862 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp3P28862 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Mmp3P28862 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Mmp3P28862 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp3P28862 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp3P28862 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp3P28862 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.97■□□□□ 0.63
Mmp3P28862 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp3P28862 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp3P28862 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp3P28862 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Mmp3P28862 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Mmp3P28862 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Mmp3P28862 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp3P28862 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.97■□□□□ 0.63
Mmp3P28862 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.97■□□□□ 0.63
Mmp3P28862 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.97■□□□□ 0.63
Mmp3P28862 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp3P28862 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp3P28862 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp3P28862 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Mmp3P28862 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
Mmp3P28862 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp3P28862 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.96■□□□□ 0.63
Mmp3P28862 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Mmp3P28862 Gm45058-201ENSMUST00000205810 766 ntBASIC18.96■□□□□ 0.63
Mmp3P28862 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp3P28862 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp3P28862 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp3P28862 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp3P28862 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp3P28862 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp3P28862 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp3P28862 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp3P28862 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Mmp3P28862 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp3P28862 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp3P28862 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp3P28862 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp3P28862 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp3P28862 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp3P28862 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Mmp3P28862 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
Mmp3P28862 Gm7638-201ENSMUST00000121348 967 ntBASIC18.95■□□□□ 0.62
Mmp3P28862 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.95■□□□□ 0.62
Mmp3P28862 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp3P28862 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp3P28862 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp3P28862 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp3P28862 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp3P28862 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Mmp3P28862 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.95■□□□□ 0.62
Mmp3P28862 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mmp3P28862 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Mmp3P28862 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mmp3P28862 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mmp3P28862 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mmp3P28862 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.94■□□□□ 0.62
Mmp3P28862 Gm2274-201ENSMUST00000184539 609 ntBASIC18.94■□□□□ 0.62
Mmp3P28862 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mmp3P28862 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mmp3P28862 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mmp3P28862 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mmp3P28862 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mmp3P28862 Gm6659-201ENSMUST00000174752 547 ntBASIC18.93■□□□□ 0.62
Mmp3P28862 Gm7791-201ENSMUST00000219066 539 ntBASIC18.93■□□□□ 0.62
Mmp3P28862 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mmp3P28862 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mmp3P28862 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Mmp3P28862 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mmp3P28862 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mmp3P28862 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mmp3P28862 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Mmp3P28862 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Mmp3P28862 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Mmp3P28862 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Mmp3P28862 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Mmp3P28862 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms