Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.61■□□□□ 0.41
Nckap1P28660 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.61■□□□□ 0.41
Nckap1P28660 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nckap1P28660 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nckap1P28660 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nckap1P28660 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Nckap1P28660 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nckap1P28660 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nckap1P28660 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.61■□□□□ 0.41
Nckap1P28660 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nckap1P28660 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.61■□□□□ 0.41
Nckap1P28660 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.61■□□□□ 0.41
Nckap1P28660 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nckap1P28660 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nckap1P28660 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nckap1P28660 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nckap1P28660 Gm10418-201ENSMUST00000100943 576 ntBASIC17.6■□□□□ 0.41
Nckap1P28660 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nckap1P28660 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.6■□□□□ 0.41
Nckap1P28660 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nckap1P28660 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nckap1P28660 Gm27463-201ENSMUST00000183569 57 ntBASIC17.6■□□□□ 0.41
Nckap1P28660 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nckap1P28660 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nckap1P28660 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nckap1P28660 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nckap1P28660 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nckap1P28660 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Nckap1P28660 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nckap1P28660 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nckap1P28660 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nckap1P28660 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nckap1P28660 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nckap1P28660 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nckap1P28660 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.59■□□□□ 0.41
Nckap1P28660 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nckap1P28660 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.59■□□□□ 0.41
Nckap1P28660 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nckap1P28660 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nckap1P28660 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nckap1P28660 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nckap1P28660 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.59■□□□□ 0.41
Nckap1P28660 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nckap1P28660 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nckap1P28660 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nckap1P28660 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Nckap1P28660 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
Nckap1P28660 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nckap1P28660 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.58■□□□□ 0.4
Nckap1P28660 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.58■□□□□ 0.4
Nckap1P28660 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Nckap1P28660 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.58■□□□□ 0.4
Nckap1P28660 Gm7889-201ENSMUST00000185591 958 ntBASIC17.58■□□□□ 0.4
Nckap1P28660 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nckap1P28660 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nckap1P28660 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nckap1P28660 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Nckap1P28660 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nckap1P28660 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nckap1P28660 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nckap1P28660 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nckap1P28660 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
Nckap1P28660 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nckap1P28660 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Nckap1P28660 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nckap1P28660 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nckap1P28660 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nckap1P28660 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nckap1P28660 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Nckap1P28660 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.57■□□□□ 0.4
Nckap1P28660 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nckap1P28660 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nckap1P28660 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nckap1P28660 Gm4974-201ENSMUST00000209974 875 ntBASIC17.57■□□□□ 0.4
Nckap1P28660 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.57■□□□□ 0.4
Nckap1P28660 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.57■□□□□ 0.4
Nckap1P28660 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nckap1P28660 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nckap1P28660 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nckap1P28660 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Nckap1P28660 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nckap1P28660 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nckap1P28660 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.56■□□□□ 0.4
Nckap1P28660 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nckap1P28660 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Nckap1P28660 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nckap1P28660 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nckap1P28660 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Nckap1P28660 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nckap1P28660 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Nckap1P28660 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nckap1P28660 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nckap1P28660 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nckap1P28660 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Nckap1P28660 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nckap1P28660 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Nckap1P28660 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nckap1P28660 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nckap1P28660 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nckap1P28660 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms