Protein–RNA interactions for Protein: P28235

Gja4, Gap junction alpha-4 protein, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gja4P28235 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gja4P28235 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Gja4P28235 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gja4P28235 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Gja4P28235 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.7■□□□□ 0.42
Gja4P28235 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gja4P28235 Gm13474-201ENSMUST00000122466 815 ntBASIC17.7■□□□□ 0.42
Gja4P28235 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.7■□□□□ 0.42
Gja4P28235 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gja4P28235 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gja4P28235 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Gja4P28235 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gja4P28235 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gja4P28235 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gja4P28235 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gja4P28235 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
Gja4P28235 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gja4P28235 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gja4P28235 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Gja4P28235 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gja4P28235 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gja4P28235 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gja4P28235 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.69■□□□□ 0.42
Gja4P28235 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gja4P28235 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gja4P28235 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gja4P28235 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gja4P28235 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gja4P28235 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gja4P28235 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gja4P28235 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Gja4P28235 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.68■□□□□ 0.42
Gja4P28235 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.68■□□□□ 0.42
Gja4P28235 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gja4P28235 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gja4P28235 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.68■□□□□ 0.42
Gja4P28235 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.68■□□□□ 0.42
Gja4P28235 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gja4P28235 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.68■□□□□ 0.42
Gja4P28235 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gja4P28235 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gja4P28235 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gja4P28235 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.68■□□□□ 0.42
Gja4P28235 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Gja4P28235 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Gja4P28235 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gja4P28235 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gja4P28235 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gja4P28235 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gja4P28235 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gja4P28235 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gja4P28235 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gja4P28235 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.67■□□□□ 0.42
Gja4P28235 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Gja4P28235 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gja4P28235 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Gja4P28235 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.67■□□□□ 0.42
Gja4P28235 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gja4P28235 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gja4P28235 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.67■□□□□ 0.42
Gja4P28235 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.67■□□□□ 0.42
Gja4P28235 Gm7370-201ENSMUST00000219471 767 ntBASIC17.67■□□□□ 0.42
Gja4P28235 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gja4P28235 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gja4P28235 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gja4P28235 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gja4P28235 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gja4P28235 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gja4P28235 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gja4P28235 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gja4P28235 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Gja4P28235 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gja4P28235 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gja4P28235 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gja4P28235 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gja4P28235 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gja4P28235 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gja4P28235 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Gja4P28235 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.66■□□□□ 0.42
Gja4P28235 Gm25016-201ENSMUST00000158399 131 ntBASIC17.66■□□□□ 0.42
Gja4P28235 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gja4P28235 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gja4P28235 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gja4P28235 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.66■□□□□ 0.42
Gja4P28235 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gja4P28235 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gja4P28235 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Gja4P28235 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Gja4P28235 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gja4P28235 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gja4P28235 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.65■□□□□ 0.42
Gja4P28235 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gja4P28235 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gja4P28235 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.65■□□□□ 0.42
Gja4P28235 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gja4P28235 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gja4P28235 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Gja4P28235 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gja4P28235 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gja4P28235 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms