Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BdnfP21237 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
BdnfP21237 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
BdnfP21237 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
BdnfP21237 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BdnfP21237 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BdnfP21237 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
BdnfP21237 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.94■□□□□ 0.3
BdnfP21237 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.94■□□□□ 0.3
BdnfP21237 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
BdnfP21237 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
BdnfP21237 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BdnfP21237 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BdnfP21237 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BdnfP21237 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BdnfP21237 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
BdnfP21237 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
BdnfP21237 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.94■□□□□ 0.3
BdnfP21237 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
BdnfP21237 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
BdnfP21237 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
BdnfP21237 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BdnfP21237 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BdnfP21237 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.93■□□□□ 0.3
BdnfP21237 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
BdnfP21237 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
BdnfP21237 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BdnfP21237 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.93■□□□□ 0.3
BdnfP21237 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BdnfP21237 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BdnfP21237 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
BdnfP21237 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BdnfP21237 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
BdnfP21237 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
BdnfP21237 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.93■□□□□ 0.3
BdnfP21237 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BdnfP21237 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
BdnfP21237 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BdnfP21237 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BdnfP21237 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
BdnfP21237 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BdnfP21237 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BdnfP21237 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
BdnfP21237 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BdnfP21237 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.92■□□□□ 0.3
BdnfP21237 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BdnfP21237 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BdnfP21237 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BdnfP21237 Gm22325-201ENSMUST00000158904 308 ntBASIC16.92■□□□□ 0.3
BdnfP21237 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BdnfP21237 Gm26571-201ENSMUST00000181399 666 ntBASIC16.92■□□□□ 0.3
BdnfP21237 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.92■□□□□ 0.3
BdnfP21237 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BdnfP21237 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BdnfP21237 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
BdnfP21237 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.92■□□□□ 0.3
BdnfP21237 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BdnfP21237 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
BdnfP21237 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.92■□□□□ 0.3
BdnfP21237 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BdnfP21237 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BdnfP21237 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
BdnfP21237 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.91■□□□□ 0.3
BdnfP21237 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BdnfP21237 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
BdnfP21237 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BdnfP21237 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
BdnfP21237 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BdnfP21237 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BdnfP21237 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
BdnfP21237 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BdnfP21237 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.91■□□□□ 0.3
BdnfP21237 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.91■□□□□ 0.3
BdnfP21237 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BdnfP21237 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BdnfP21237 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
BdnfP21237 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BdnfP21237 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
BdnfP21237 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BdnfP21237 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
BdnfP21237 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
BdnfP21237 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.9■□□□□ 0.3
BdnfP21237 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.9■□□□□ 0.3
BdnfP21237 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BdnfP21237 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BdnfP21237 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BdnfP21237 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BdnfP21237 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.9■□□□□ 0.3
BdnfP21237 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
BdnfP21237 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BdnfP21237 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.89■□□□□ 0.3
BdnfP21237 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
BdnfP21237 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
BdnfP21237 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
BdnfP21237 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BdnfP21237 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.89■□□□□ 0.29
BdnfP21237 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
BdnfP21237 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
BdnfP21237 Gm18284-201ENSMUST00000172604 624 ntBASIC16.89■□□□□ 0.29
BdnfP21237 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms