Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC14.57□□□□□ -0.08
Sdc1P18828 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sdc1P18828 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
Sdc1P18828 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Sdc1P18828 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sdc1P18828 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.57□□□□□ -0.08
Sdc1P18828 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sdc1P18828 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sdc1P18828 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Sdc1P18828 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Sdc1P18828 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sdc1P18828 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sdc1P18828 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.56□□□□□ -0.08
Sdc1P18828 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sdc1P18828 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sdc1P18828 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sdc1P18828 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sdc1P18828 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sdc1P18828 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Sdc1P18828 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sdc1P18828 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sdc1P18828 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sdc1P18828 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sdc1P18828 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Sdc1P18828 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sdc1P18828 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sdc1P18828 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Sdc1P18828 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Sdc1P18828 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sdc1P18828 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sdc1P18828 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Sdc1P18828 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
Sdc1P18828 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sdc1P18828 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC14.56□□□□□ -0.08
Sdc1P18828 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sdc1P18828 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sdc1P18828 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Sdc1P18828 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sdc1P18828 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC14.55□□□□□ -0.08
Sdc1P18828 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sdc1P18828 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sdc1P18828 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sdc1P18828 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sdc1P18828 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sdc1P18828 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC14.55□□□□□ -0.08
Sdc1P18828 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC14.55□□□□□ -0.08
Sdc1P18828 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sdc1P18828 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sdc1P18828 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Sdc1P18828 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sdc1P18828 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sdc1P18828 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Sdc1P18828 Gm10209-201ENSMUST00000203397 1607 ntBASIC14.55□□□□□ -0.08
Sdc1P18828 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sdc1P18828 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sdc1P18828 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sdc1P18828 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.55□□□□□ -0.08
Sdc1P18828 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sdc1P18828 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sdc1P18828 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Sdc1P18828 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sdc1P18828 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sdc1P18828 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sdc1P18828 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sdc1P18828 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sdc1P18828 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sdc1P18828 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sdc1P18828 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Sdc1P18828 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC14.54□□□□□ -0.08
Sdc1P18828 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Sdc1P18828 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sdc1P18828 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sdc1P18828 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sdc1P18828 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sdc1P18828 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sdc1P18828 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sdc1P18828 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sdc1P18828 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.54□□□□□ -0.08
Sdc1P18828 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sdc1P18828 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sdc1P18828 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Sdc1P18828 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sdc1P18828 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sdc1P18828 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sdc1P18828 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sdc1P18828 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sdc1P18828 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sdc1P18828 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sdc1P18828 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sdc1P18828 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sdc1P18828 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sdc1P18828 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sdc1P18828 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sdc1P18828 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Sdc1P18828 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sdc1P18828 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC14.53□□□□□ -0.08
Sdc1P18828 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC14.53□□□□□ -0.08
Sdc1P18828 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sdc1P18828 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sdc1P18828 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms