Protein–RNA interactions for Protein: P16388

Kcna1, Potassium voltage-gated channel subfamily A member 1, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcna1P16388 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Kcna1P16388 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Kcna1P16388 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Kcna1P16388 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.11■□□□□ 0.81
Kcna1P16388 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Kcna1P16388 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Kcna1P16388 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Kcna1P16388 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Kcna1P16388 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Kcna1P16388 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Kcna1P16388 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Kcna1P16388 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Kcna1P16388 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Kcna1P16388 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Kcna1P16388 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Kcna1P16388 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Kcna1P16388 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Kcna1P16388 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
Kcna1P16388 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Kcna1P16388 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.1■□□□□ 0.81
Kcna1P16388 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Kcna1P16388 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Kcna1P16388 Mir6982-201ENSMUST00000184354 68 ntBASIC20.1■□□□□ 0.81
Kcna1P16388 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Kcna1P16388 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Kcna1P16388 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Kcna1P16388 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Kcna1P16388 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Kcna1P16388 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Kcna1P16388 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Kcna1P16388 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Kcna1P16388 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Kcna1P16388 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.1■□□□□ 0.81
Kcna1P16388 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Kcna1P16388 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Kcna1P16388 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Kcna1P16388 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Kcna1P16388 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Kcna1P16388 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.09■□□□□ 0.81
Kcna1P16388 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Kcna1P16388 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Kcna1P16388 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Kcna1P16388 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Kcna1P16388 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Kcna1P16388 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.09■□□□□ 0.81
Kcna1P16388 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Kcna1P16388 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Kcna1P16388 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Kcna1P16388 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Kcna1P16388 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Kcna1P16388 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Kcna1P16388 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.08■□□□□ 0.81
Kcna1P16388 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Kcna1P16388 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Kcna1P16388 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Kcna1P16388 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Kcna1P16388 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Kcna1P16388 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20.08■□□□□ 0.81
Kcna1P16388 Gm37055-201ENSMUST00000191866 133 ntBASIC20.08■□□□□ 0.81
Kcna1P16388 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.08■□□□□ 0.81
Kcna1P16388 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Kcna1P16388 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Kcna1P16388 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.8
Kcna1P16388 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Kcna1P16388 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Kcna1P16388 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Kcna1P16388 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.07■□□□□ 0.8
Kcna1P16388 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.07■□□□□ 0.8
Kcna1P16388 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.07■□□□□ 0.8
Kcna1P16388 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Kcna1P16388 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Kcna1P16388 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
Kcna1P16388 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Kcna1P16388 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Kcna1P16388 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Kcna1P16388 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Kcna1P16388 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Kcna1P16388 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Kcna1P16388 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Kcna1P16388 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Kcna1P16388 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.06■□□□□ 0.8
Kcna1P16388 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Kcna1P16388 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Kcna1P16388 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Kcna1P16388 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
Kcna1P16388 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Kcna1P16388 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Kcna1P16388 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.06■□□□□ 0.8
Kcna1P16388 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Kcna1P16388 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Kcna1P16388 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Kcna1P16388 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Kcna1P16388 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.05■□□□□ 0.8
Kcna1P16388 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Kcna1P16388 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.05■□□□□ 0.8
Kcna1P16388 Gm10418-201ENSMUST00000100943 576 ntBASIC20.05■□□□□ 0.8
Kcna1P16388 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.05■□□□□ 0.8
Kcna1P16388 Gm21814-202ENSMUST00000203277 873 ntBASIC20.05■□□□□ 0.8
Kcna1P16388 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Kcna1P16388 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms