Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.13■□□□□ 0.33
Fv4P11370 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fv4P11370 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fv4P11370 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.13■□□□□ 0.33
Fv4P11370 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.13■□□□□ 0.33
Fv4P11370 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fv4P11370 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fv4P11370 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fv4P11370 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fv4P11370 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fv4P11370 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fv4P11370 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Fv4P11370 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.12■□□□□ 0.33
Fv4P11370 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Fv4P11370 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fv4P11370 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fv4P11370 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fv4P11370 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fv4P11370 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.12■□□□□ 0.33
Fv4P11370 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Fv4P11370 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fv4P11370 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Fv4P11370 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fv4P11370 Gm29791-202ENSMUST00000207888 369 ntBASIC17.12■□□□□ 0.33
Fv4P11370 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Fv4P11370 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.12■□□□□ 0.33
Fv4P11370 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fv4P11370 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fv4P11370 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fv4P11370 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fv4P11370 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Fv4P11370 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Fv4P11370 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Fv4P11370 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.12■□□□□ 0.33
Fv4P11370 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Fv4P11370 Flg-201ENSMUST00000050758 1488 ntBASIC17.12■□□□□ 0.33
Fv4P11370 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Fv4P11370 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fv4P11370 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Fv4P11370 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fv4P11370 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.11■□□□□ 0.33
Fv4P11370 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Fv4P11370 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.11■□□□□ 0.33
Fv4P11370 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Fv4P11370 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Fv4P11370 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Fv4P11370 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fv4P11370 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Fv4P11370 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Fv4P11370 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.11■□□□□ 0.33
Fv4P11370 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Fv4P11370 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fv4P11370 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fv4P11370 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Fv4P11370 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fv4P11370 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fv4P11370 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Fv4P11370 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Fv4P11370 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Fv4P11370 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fv4P11370 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fv4P11370 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.1■□□□□ 0.33
Fv4P11370 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fv4P11370 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.1■□□□□ 0.33
Fv4P11370 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
Fv4P11370 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fv4P11370 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fv4P11370 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fv4P11370 Rab3c-203ENSMUST00000224180 967 ntBASIC17.1■□□□□ 0.33
Fv4P11370 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fv4P11370 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.1■□□□□ 0.33
Fv4P11370 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Fv4P11370 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fv4P11370 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fv4P11370 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.1■□□□□ 0.33
Fv4P11370 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fv4P11370 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fv4P11370 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fv4P11370 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fv4P11370 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Fv4P11370 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Fv4P11370 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Fv4P11370 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Fv4P11370 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Fv4P11370 Gm10418-201ENSMUST00000100943 576 ntBASIC17.09■□□□□ 0.33
Fv4P11370 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Fv4P11370 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.09■□□□□ 0.33
Fv4P11370 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.09■□□□□ 0.33
Fv4P11370 Mir5133-201ENSMUST00000174955 77 ntBASIC17.09■□□□□ 0.33
Fv4P11370 Gm27405-201ENSMUST00000184201 112 ntBASIC17.09■□□□□ 0.33
Fv4P11370 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Fv4P11370 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Fv4P11370 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.09■□□□□ 0.33
Fv4P11370 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.09■□□□□ 0.33
Fv4P11370 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Fv4P11370 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Fv4P11370 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Fv4P11370 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Fv4P11370 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.09■□□□□ 0.33
Fv4P11370 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms