Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccl3P10855 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccl3P10855 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccl3P10855 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccl3P10855 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccl3P10855 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.66■□□□□ 0.1
Ccl3P10855 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ccl3P10855 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccl3P10855 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ccl3P10855 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccl3P10855 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccl3P10855 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccl3P10855 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.65■□□□□ 0.1
Ccl3P10855 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Ccl3P10855 Mir1668-201ENSMUST00000184114 107 ntBASIC15.65■□□□□ 0.1
Ccl3P10855 Gm5587-201ENSMUST00000206270 674 ntBASIC15.65■□□□□ 0.1
Ccl3P10855 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Ccl3P10855 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Ccl3P10855 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccl3P10855 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccl3P10855 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccl3P10855 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.65■□□□□ 0.1
Ccl3P10855 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccl3P10855 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.65■□□□□ 0.1
Ccl3P10855 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ccl3P10855 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
Ccl3P10855 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccl3P10855 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.64■□□□□ 0.09
Ccl3P10855 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccl3P10855 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccl3P10855 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccl3P10855 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ccl3P10855 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccl3P10855 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccl3P10855 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccl3P10855 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Ccl3P10855 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ccl3P10855 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ccl3P10855 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ccl3P10855 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.64■□□□□ 0.09
Ccl3P10855 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccl3P10855 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Ccl3P10855 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccl3P10855 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccl3P10855 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ccl3P10855 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ccl3P10855 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Ccl3P10855 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccl3P10855 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Ccl3P10855 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccl3P10855 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccl3P10855 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ccl3P10855 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.63■□□□□ 0.09
Ccl3P10855 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccl3P10855 Gm9731-201ENSMUST00000209480 747 ntBASIC15.63■□□□□ 0.09
Ccl3P10855 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.63■□□□□ 0.09
Ccl3P10855 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.63■□□□□ 0.09
Ccl3P10855 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
Ccl3P10855 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Ccl3P10855 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.63■□□□□ 0.09
Ccl3P10855 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ccl3P10855 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Ccl3P10855 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ccl3P10855 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Ccl3P10855 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccl3P10855 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ccl3P10855 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.62■□□□□ 0.09
Ccl3P10855 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.62■□□□□ 0.09
Ccl3P10855 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ccl3P10855 Gm27704-201ENSMUST00000185094 107 ntBASIC15.62■□□□□ 0.09
Ccl3P10855 Gm37025-201ENSMUST00000195159 829 ntBASIC15.62■□□□□ 0.09
Ccl3P10855 Gm7213-201ENSMUST00000215977 950 ntBASIC15.62■□□□□ 0.09
Ccl3P10855 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ccl3P10855 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ccl3P10855 Il3ra-202ENSMUST00000223589 738 ntBASIC15.62■□□□□ 0.09
Ccl3P10855 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Ccl3P10855 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccl3P10855 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ccl3P10855 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Ccl3P10855 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccl3P10855 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccl3P10855 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Ccl3P10855 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccl3P10855 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ccl3P10855 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccl3P10855 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccl3P10855 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.61■□□□□ 0.09
Ccl3P10855 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccl3P10855 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.61■□□□□ 0.09
Ccl3P10855 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.61■□□□□ 0.09
Ccl3P10855 Gm9013-201ENSMUST00000132939 882 ntBASIC15.61■□□□□ 0.09
Ccl3P10855 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ccl3P10855 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ccl3P10855 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccl3P10855 Dapk1-207ENSMUST00000226059 5009 ntBASIC15.61■□□□□ 0.09
Ccl3P10855 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.61■□□□□ 0.09
Ccl3P10855 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccl3P10855 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ccl3P10855 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ccl3P10855 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms