Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Ccl1P10146 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccl1P10146 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccl1P10146 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Ccl1P10146 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.78□□□□□ -0.2
Ccl1P10146 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccl1P10146 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.78□□□□□ -0.2
Ccl1P10146 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Ccl1P10146 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccl1P10146 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccl1P10146 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccl1P10146 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccl1P10146 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC13.78□□□□□ -0.2
Ccl1P10146 AC107452.1-201ENSMUST00000227963 481 ntBASIC13.78□□□□□ -0.2
Ccl1P10146 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccl1P10146 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccl1P10146 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccl1P10146 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccl1P10146 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccl1P10146 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccl1P10146 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccl1P10146 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccl1P10146 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccl1P10146 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccl1P10146 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccl1P10146 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccl1P10146 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccl1P10146 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccl1P10146 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccl1P10146 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ccl1P10146 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ccl1P10146 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
Ccl1P10146 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC13.77□□□□□ -0.21
Ccl1P10146 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccl1P10146 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Ccl1P10146 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC13.77□□□□□ -0.21
Ccl1P10146 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ccl1P10146 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Ccl1P10146 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccl1P10146 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccl1P10146 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccl1P10146 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccl1P10146 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccl1P10146 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccl1P10146 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccl1P10146 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccl1P10146 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccl1P10146 Gm37519-201ENSMUST00000191687 2210 ntBASIC13.76□□□□□ -0.21
Ccl1P10146 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccl1P10146 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccl1P10146 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccl1P10146 Gm37374-201ENSMUST00000194954 1829 ntBASIC13.76□□□□□ -0.21
Ccl1P10146 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Ccl1P10146 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccl1P10146 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccl1P10146 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccl1P10146 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccl1P10146 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccl1P10146 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccl1P10146 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccl1P10146 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccl1P10146 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccl1P10146 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Ccl1P10146 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccl1P10146 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccl1P10146 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccl1P10146 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccl1P10146 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Ccl1P10146 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccl1P10146 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccl1P10146 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccl1P10146 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccl1P10146 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccl1P10146 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ccl1P10146 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ccl1P10146 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Ccl1P10146 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccl1P10146 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
Ccl1P10146 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccl1P10146 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccl1P10146 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccl1P10146 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccl1P10146 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.75□□□□□ -0.21
Ccl1P10146 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccl1P10146 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccl1P10146 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC13.75□□□□□ -0.21
Ccl1P10146 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccl1P10146 Gm5522-201ENSMUST00000189483 1242 ntBASIC13.75□□□□□ -0.21
Ccl1P10146 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC13.75□□□□□ -0.21
Ccl1P10146 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccl1P10146 Gm5576-201ENSMUST00000075809 1236 ntBASIC13.75□□□□□ -0.21
Ccl1P10146 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccl1P10146 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccl1P10146 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccl1P10146 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ccl1P10146 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccl1P10146 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccl1P10146 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC13.74□□□□□ -0.21
Ccl1P10146 Gm10167-201ENSMUST00000150411 1479 ntBASIC13.74□□□□□ -0.21
Ccl1P10146 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms