Protein–RNA interactions for Protein: P0DOY1

Dnmt3c, DNA (cytosine-5)-methyltransferase 3C, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3cP0DOY1 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Dnmt3cP0DOY1 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Dnmt3cP0DOY1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Dnmt3cP0DOY1 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Dnmt3cP0DOY1 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.68■□□□□ 0.42
Dnmt3cP0DOY1 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Dnmt3cP0DOY1 Gm13168-201ENSMUST00000121771 632 ntBASIC17.68■□□□□ 0.42
Dnmt3cP0DOY1 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Dnmt3cP0DOY1 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Dnmt3cP0DOY1 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Dnmt3cP0DOY1 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Dnmt3cP0DOY1 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.68■□□□□ 0.42
Dnmt3cP0DOY1 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Dnmt3cP0DOY1 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.68■□□□□ 0.42
Dnmt3cP0DOY1 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Dnmt3cP0DOY1 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Dnmt3cP0DOY1 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Dnmt3cP0DOY1 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Dnmt3cP0DOY1 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Dnmt3cP0DOY1 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Dnmt3cP0DOY1 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Dnmt3cP0DOY1 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Dnmt3cP0DOY1 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.67■□□□□ 0.42
Dnmt3cP0DOY1 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.67■□□□□ 0.42
Dnmt3cP0DOY1 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.67■□□□□ 0.42
Dnmt3cP0DOY1 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Dnmt3cP0DOY1 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Dnmt3cP0DOY1 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Dnmt3cP0DOY1 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Dnmt3cP0DOY1 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.67■□□□□ 0.42
Dnmt3cP0DOY1 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Dnmt3cP0DOY1 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.66■□□□□ 0.42
Dnmt3cP0DOY1 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Dnmt3cP0DOY1 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.66■□□□□ 0.42
Dnmt3cP0DOY1 Gm8969-201ENSMUST00000199694 526 ntBASIC17.66■□□□□ 0.42
Dnmt3cP0DOY1 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Dnmt3cP0DOY1 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.66■□□□□ 0.42
Dnmt3cP0DOY1 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Dnmt3cP0DOY1 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Dnmt3cP0DOY1 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Dnmt3cP0DOY1 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Dnmt3cP0DOY1 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Dnmt3cP0DOY1 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
Dnmt3cP0DOY1 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Dnmt3cP0DOY1 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.66■□□□□ 0.42
Dnmt3cP0DOY1 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Dnmt3cP0DOY1 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Dnmt3cP0DOY1 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Dnmt3cP0DOY1 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Dnmt3cP0DOY1 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.65■□□□□ 0.42
Dnmt3cP0DOY1 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Dnmt3cP0DOY1 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Dnmt3cP0DOY1 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.65■□□□□ 0.42
Dnmt3cP0DOY1 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Dnmt3cP0DOY1 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Dnmt3cP0DOY1 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.65■□□□□ 0.42
Dnmt3cP0DOY1 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Dnmt3cP0DOY1 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Dnmt3cP0DOY1 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Dnmt3cP0DOY1 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.65■□□□□ 0.42
Dnmt3cP0DOY1 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Dnmt3cP0DOY1 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Dnmt3cP0DOY1 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Dnmt3cP0DOY1 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Dnmt3cP0DOY1 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Dnmt3cP0DOY1 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Dnmt3cP0DOY1 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Dnmt3cP0DOY1 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.64■□□□□ 0.42
Dnmt3cP0DOY1 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Dnmt3cP0DOY1 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Dnmt3cP0DOY1 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Dnmt3cP0DOY1 Mir7071-201ENSMUST00000184847 69 ntBASIC17.64■□□□□ 0.41
Dnmt3cP0DOY1 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.64■□□□□ 0.41
Dnmt3cP0DOY1 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.64■□□□□ 0.41
Dnmt3cP0DOY1 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Dnmt3cP0DOY1 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Dnmt3cP0DOY1 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Dnmt3cP0DOY1 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Dnmt3cP0DOY1 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Dnmt3cP0DOY1 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Dnmt3cP0DOY1 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Dnmt3cP0DOY1 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.64■□□□□ 0.41
Dnmt3cP0DOY1 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Dnmt3cP0DOY1 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Dnmt3cP0DOY1 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Dnmt3cP0DOY1 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Dnmt3cP0DOY1 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Dnmt3cP0DOY1 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Dnmt3cP0DOY1 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.63■□□□□ 0.41
Dnmt3cP0DOY1 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Dnmt3cP0DOY1 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Dnmt3cP0DOY1 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Dnmt3cP0DOY1 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Dnmt3cP0DOY1 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.63■□□□□ 0.41
Dnmt3cP0DOY1 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.63■□□□□ 0.41
Dnmt3cP0DOY1 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Dnmt3cP0DOY1 Gm10812-201ENSMUST00000099864 546 ntBASIC17.63■□□□□ 0.41
Dnmt3cP0DOY1 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.63■□□□□ 0.41
Dnmt3cP0DOY1 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Dnmt3cP0DOY1 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms