Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Hoxc9P09633 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Hoxc9P09633 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Hoxc9P09633 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Hoxc9P09633 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Hoxc9P09633 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Hoxc9P09633 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC23.05■■□□□ 1.28
Hoxc9P09633 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC23.05■■□□□ 1.28
Hoxc9P09633 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC23.05■■□□□ 1.28
Hoxc9P09633 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Hoxc9P09633 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC23.04■■□□□ 1.28
Hoxc9P09633 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Hoxc9P09633 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Hoxc9P09633 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
Hoxc9P09633 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC23.04■■□□□ 1.28
Hoxc9P09633 Gm27741-201ENSMUST00000185060 237 ntBASIC23.04■■□□□ 1.28
Hoxc9P09633 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC23.04■■□□□ 1.28
Hoxc9P09633 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Hoxc9P09633 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Hoxc9P09633 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Hoxc9P09633 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Hoxc9P09633 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Hoxc9P09633 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Hoxc9P09633 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC23.04■■□□□ 1.28
Hoxc9P09633 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Hoxc9P09633 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Hoxc9P09633 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Hoxc9P09633 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Hoxc9P09633 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC23.03■■□□□ 1.28
Hoxc9P09633 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Hoxc9P09633 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Hoxc9P09633 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Hoxc9P09633 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Hoxc9P09633 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Hoxc9P09633 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Hoxc9P09633 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Hoxc9P09633 Gm14859-201ENSMUST00000117752 357 ntBASIC23.03■■□□□ 1.28
Hoxc9P09633 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC23.03■■□□□ 1.28
Hoxc9P09633 Gm7284-201ENSMUST00000131667 944 ntBASIC23.03■■□□□ 1.28
Hoxc9P09633 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Hoxc9P09633 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
Hoxc9P09633 AC120002.2-201ENSMUST00000220205 773 ntBASIC23.03■■□□□ 1.28
Hoxc9P09633 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Hoxc9P09633 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Hoxc9P09633 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC23.03■■□□□ 1.28
Hoxc9P09633 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
Hoxc9P09633 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Hoxc9P09633 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Hoxc9P09633 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
Hoxc9P09633 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Hoxc9P09633 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC23.02■■□□□ 1.28
Hoxc9P09633 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
Hoxc9P09633 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Hoxc9P09633 Gm9103-201ENSMUST00000119371 405 ntBASIC23.02■■□□□ 1.28
Hoxc9P09633 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC23.02■■□□□ 1.28
Hoxc9P09633 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Hoxc9P09633 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Hoxc9P09633 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Hoxc9P09633 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Hoxc9P09633 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Hoxc9P09633 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC23.02■■□□□ 1.28
Hoxc9P09633 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
Hoxc9P09633 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Hoxc9P09633 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Hoxc9P09633 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Hoxc9P09633 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Hoxc9P09633 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Hoxc9P09633 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Hoxc9P09633 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Hoxc9P09633 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Hoxc9P09633 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Hoxc9P09633 Gm27389-201ENSMUST00000183622 195 ntBASIC23.01■■□□□ 1.27
Hoxc9P09633 Gm5587-201ENSMUST00000206270 674 ntBASIC23.01■■□□□ 1.27
Hoxc9P09633 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC23.01■■□□□ 1.27
Hoxc9P09633 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Hoxc9P09633 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Hoxc9P09633 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Hoxc9P09633 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Hoxc9P09633 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
Hoxc9P09633 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC23■■□□□ 1.27
Hoxc9P09633 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Hoxc9P09633 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC23■■□□□ 1.27
Hoxc9P09633 Gm7213-201ENSMUST00000215977 950 ntBASIC23■■□□□ 1.27
Hoxc9P09633 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Hoxc9P09633 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Hoxc9P09633 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Hoxc9P09633 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC23■■□□□ 1.27
Hoxc9P09633 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
Hoxc9P09633 Gm6627-201ENSMUST00000218299 2386 ntBASIC22.99■■□□□ 1.27
Hoxc9P09633 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Hoxc9P09633 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC22.99■■□□□ 1.27
Hoxc9P09633 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Hoxc9P09633 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Hoxc9P09633 Fst-202ENSMUST00000223640 2612 ntBASIC22.99■■□□□ 1.27
Hoxc9P09633 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Hoxc9P09633 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Hoxc9P09633 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Hoxc9P09633 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Hoxc9P09633 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Hoxc9P09633 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms