Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TnfP06804 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TnfP06804 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TnfP06804 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TnfP06804 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TnfP06804 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TnfP06804 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.82■□□□□ 0.6
TnfP06804 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TnfP06804 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.82■□□□□ 0.6
TnfP06804 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TnfP06804 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.82■□□□□ 0.6
TnfP06804 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
TnfP06804 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TnfP06804 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.82■□□□□ 0.6
TnfP06804 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TnfP06804 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TnfP06804 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TnfP06804 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TnfP06804 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TnfP06804 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TnfP06804 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TnfP06804 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TnfP06804 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TnfP06804 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TnfP06804 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TnfP06804 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TnfP06804 Gm13559-201ENSMUST00000120476 863 ntBASIC18.81■□□□□ 0.6
TnfP06804 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TnfP06804 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.81■□□□□ 0.6
TnfP06804 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TnfP06804 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.81■□□□□ 0.6
TnfP06804 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TnfP06804 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TnfP06804 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TnfP06804 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TnfP06804 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TnfP06804 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TnfP06804 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TnfP06804 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TnfP06804 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.8■□□□□ 0.6
TnfP06804 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TnfP06804 Gm38027-201ENSMUST00000192315 235 ntBASIC18.8■□□□□ 0.6
TnfP06804 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TnfP06804 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TnfP06804 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TnfP06804 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TnfP06804 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TnfP06804 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TnfP06804 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TnfP06804 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TnfP06804 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TnfP06804 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TnfP06804 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TnfP06804 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TnfP06804 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.79■□□□□ 0.6
TnfP06804 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.79■□□□□ 0.6
TnfP06804 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TnfP06804 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TnfP06804 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TnfP06804 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TnfP06804 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TnfP06804 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TnfP06804 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TnfP06804 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.78■□□□□ 0.6
TnfP06804 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.78■□□□□ 0.6
TnfP06804 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TnfP06804 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.78■□□□□ 0.6
TnfP06804 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.78■□□□□ 0.6
TnfP06804 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TnfP06804 Gm7977-201ENSMUST00000193787 748 ntBASIC18.78■□□□□ 0.6
TnfP06804 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TnfP06804 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TnfP06804 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TnfP06804 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
TnfP06804 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TnfP06804 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.78■□□□□ 0.6
TnfP06804 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TnfP06804 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TnfP06804 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TnfP06804 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.78■□□□□ 0.6
TnfP06804 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TnfP06804 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TnfP06804 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.77■□□□□ 0.6
TnfP06804 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TnfP06804 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TnfP06804 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TnfP06804 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TnfP06804 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TnfP06804 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
TnfP06804 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TnfP06804 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TnfP06804 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TnfP06804 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TnfP06804 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TnfP06804 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TnfP06804 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
TnfP06804 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TnfP06804 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TnfP06804 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TnfP06804 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms