Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P06328 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
P06328 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
P06328 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC12.97□□□□□ -0.33
P06328 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC12.97□□□□□ -0.33
P06328 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
P06328 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC12.97□□□□□ -0.33
P06328 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
P06328 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P06328 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P06328 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P06328 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC12.97□□□□□ -0.33
P06328 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
P06328 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
P06328 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
P06328 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
P06328 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
P06328 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
P06328 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
P06328 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
P06328 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
P06328 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC12.96□□□□□ -0.33
P06328 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
P06328 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
P06328 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
P06328 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC12.96□□□□□ -0.33
P06328 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
P06328 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
P06328 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
P06328 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC12.96□□□□□ -0.34
P06328 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC12.96□□□□□ -0.34
P06328 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
P06328 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
P06328 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
P06328 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
P06328 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC12.95□□□□□ -0.34
P06328 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P06328 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P06328 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P06328 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P06328 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
P06328 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P06328 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P06328 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
P06328 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
P06328 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
P06328 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC12.95□□□□□ -0.34
P06328 AV356131-201ENSMUST00000206201 750 ntBASIC12.95□□□□□ -0.34
P06328 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC12.95□□□□□ -0.34
P06328 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC12.95□□□□□ -0.34
P06328 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC12.95□□□□□ -0.34
P06328 Gm5874-201ENSMUST00000096101 508 ntBASIC12.95□□□□□ -0.34
P06328 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
P06328 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
P06328 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
P06328 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
P06328 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P06328 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P06328 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
P06328 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
P06328 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P06328 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
P06328 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P06328 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P06328 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P06328 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P06328 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
P06328 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P06328 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
P06328 Gm43294-201ENSMUST00000202850 2490 ntBASIC12.94□□□□□ -0.34
P06328 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
P06328 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
P06328 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC12.94□□□□□ -0.34
P06328 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P06328 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
P06328 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC12.94□□□□□ -0.34
P06328 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC12.94□□□□□ -0.34
P06328 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P06328 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P06328 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P06328 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P06328 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
P06328 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
P06328 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P06328 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
P06328 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
P06328 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
P06328 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
P06328 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
P06328 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
P06328 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
P06328 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
P06328 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P06328 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
P06328 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
P06328 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
P06328 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
P06328 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
P06328 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
P06328 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms