Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
P04214 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
P04214 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
P04214 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
P04214 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
P04214 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
P04214 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
P04214 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
P04214 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
P04214 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.6■□□□□ 0.57
P04214 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
P04214 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
P04214 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
P04214 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
P04214 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
P04214 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
P04214 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
P04214 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.59■□□□□ 0.57
P04214 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
P04214 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
P04214 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
P04214 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.59■□□□□ 0.57
P04214 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
P04214 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
P04214 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
P04214 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
P04214 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
P04214 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
P04214 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.58■□□□□ 0.57
P04214 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
P04214 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
P04214 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
P04214 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
P04214 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.58■□□□□ 0.56
P04214 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.58■□□□□ 0.56
P04214 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
P04214 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
P04214 Gm6623-201ENSMUST00000173570 544 ntBASIC18.58■□□□□ 0.56
P04214 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.58■□□□□ 0.56
P04214 Gm18115-201ENSMUST00000221209 621 ntBASIC18.58■□□□□ 0.56
P04214 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
P04214 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
P04214 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
P04214 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.58■□□□□ 0.56
P04214 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
P04214 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
P04214 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
P04214 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
P04214 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
P04214 Gm24589-201ENSMUST00000116692 94 ntBASIC18.57■□□□□ 0.56
P04214 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
P04214 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
P04214 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
P04214 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
P04214 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
P04214 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.57■□□□□ 0.56
P04214 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
P04214 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
P04214 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
P04214 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
P04214 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
P04214 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
P04214 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
P04214 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
P04214 Mir770-201ENSMUST00000103252 94 ntBASIC18.56■□□□□ 0.56
P04214 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
P04214 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.56■□□□□ 0.56
P04214 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.56■□□□□ 0.56
P04214 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
P04214 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
P04214 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
P04214 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
P04214 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
P04214 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
P04214 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
P04214 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
P04214 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
P04214 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
P04214 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
P04214 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
P04214 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
P04214 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
P04214 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
P04214 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
P04214 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
P04214 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.55■□□□□ 0.56
P04214 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
P04214 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
P04214 Actl10-202ENSMUST00000226583 1501 ntBASIC18.54■□□□□ 0.56
P04214 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
P04214 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
P04214 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
P04214 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
P04214 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
P04214 Gm37722-201ENSMUST00000193757 208 ntBASIC18.54■□□□□ 0.56
P04214 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
P04214 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
P04214 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.54■□□□□ 0.56
P04214 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
P04214 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms