Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Ifna1P01572 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ifna1P01572 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ifna1P01572 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Ifna1P01572 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Ifna1P01572 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Ifna1P01572 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ifna1P01572 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ifna1P01572 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ifna1P01572 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Ifna1P01572 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ifna1P01572 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ifna1P01572 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ifna1P01572 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ifna1P01572 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ifna1P01572 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Ifna1P01572 Gm13534-201ENSMUST00000121169 513 ntBASIC14.96□□□□□ -0.01
Ifna1P01572 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC14.96□□□□□ -0.01
Ifna1P01572 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ifna1P01572 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ifna1P01572 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.96□□□□□ -0.01
Ifna1P01572 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ifna1P01572 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Ifna1P01572 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ifna1P01572 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Ifna1P01572 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.96□□□□□ -0.02
Ifna1P01572 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ifna1P01572 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Ifna1P01572 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ifna1P01572 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ifna1P01572 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ifna1P01572 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ifna1P01572 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Ifna1P01572 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ifna1P01572 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ifna1P01572 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ifna1P01572 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ifna1P01572 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC14.95□□□□□ -0.02
Ifna1P01572 Gm45417-201ENSMUST00000209533 758 ntBASIC14.95□□□□□ -0.02
Ifna1P01572 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ifna1P01572 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ifna1P01572 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ifna1P01572 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ifna1P01572 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ifna1P01572 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ifna1P01572 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ifna1P01572 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ifna1P01572 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ifna1P01572 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Ifna1P01572 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Ifna1P01572 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ifna1P01572 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ifna1P01572 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ifna1P01572 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ifna1P01572 Gm22325-201ENSMUST00000158904 308 ntBASIC14.94□□□□□ -0.02
Ifna1P01572 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Ifna1P01572 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ifna1P01572 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ifna1P01572 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC14.94□□□□□ -0.02
Ifna1P01572 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ifna1P01572 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ifna1P01572 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Ifna1P01572 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.94□□□□□ -0.02
Ifna1P01572 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ifna1P01572 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.94□□□□□ -0.02
Ifna1P01572 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ifna1P01572 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC14.94□□□□□ -0.02
Ifna1P01572 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ifna1P01572 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ifna1P01572 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Ifna1P01572 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ifna1P01572 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Ifna1P01572 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Ifna1P01572 Reep4-203ENSMUST00000226563 1444 ntBASIC14.93□□□□□ -0.02
Ifna1P01572 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ifna1P01572 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Ifna1P01572 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ifna1P01572 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ifna1P01572 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ifna1P01572 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ifna1P01572 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ifna1P01572 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC14.93□□□□□ -0.02
Ifna1P01572 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC14.93□□□□□ -0.02
Ifna1P01572 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ifna1P01572 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ifna1P01572 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ifna1P01572 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.93□□□□□ -0.02
Ifna1P01572 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ifna1P01572 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.93□□□□□ -0.02
Ifna1P01572 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.93□□□□□ -0.02
Ifna1P01572 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ifna1P01572 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ifna1P01572 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.93□□□□□ -0.02
Ifna1P01572 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.93□□□□□ -0.02
Ifna1P01572 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ifna1P01572 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ifna1P01572 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ifna1P01572 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC14.92□□□□□ -0.02
Ifna1P01572 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ifna1P01572 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms