Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vti1aO89116 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Vti1aO89116 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.1■□□□□ 0.65
Vti1aO89116 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vti1aO89116 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Vti1aO89116 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Vti1aO89116 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vti1aO89116 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vti1aO89116 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Vti1aO89116 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Vti1aO89116 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.1■□□□□ 0.65
Vti1aO89116 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.1■□□□□ 0.65
Vti1aO89116 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.1■□□□□ 0.65
Vti1aO89116 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.1■□□□□ 0.65
Vti1aO89116 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vti1aO89116 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vti1aO89116 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vti1aO89116 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vti1aO89116 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vti1aO89116 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vti1aO89116 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vti1aO89116 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.09■□□□□ 0.65
Vti1aO89116 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vti1aO89116 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.09■□□□□ 0.65
Vti1aO89116 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vti1aO89116 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vti1aO89116 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vti1aO89116 Gm38285-201ENSMUST00000192928 922 ntBASIC19.09■□□□□ 0.65
Vti1aO89116 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.09■□□□□ 0.65
Vti1aO89116 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vti1aO89116 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vti1aO89116 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vti1aO89116 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.08■□□□□ 0.65
Vti1aO89116 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Vti1aO89116 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Vti1aO89116 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Vti1aO89116 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Vti1aO89116 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
Vti1aO89116 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Vti1aO89116 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Vti1aO89116 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.08■□□□□ 0.64
Vti1aO89116 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Vti1aO89116 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.08■□□□□ 0.64
Vti1aO89116 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Vti1aO89116 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Vti1aO89116 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.08■□□□□ 0.64
Vti1aO89116 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Vti1aO89116 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Vti1aO89116 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vti1aO89116 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vti1aO89116 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vti1aO89116 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vti1aO89116 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.07■□□□□ 0.64
Vti1aO89116 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vti1aO89116 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Vti1aO89116 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Vti1aO89116 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vti1aO89116 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.07■□□□□ 0.64
Vti1aO89116 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vti1aO89116 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vti1aO89116 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Vti1aO89116 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vti1aO89116 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vti1aO89116 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.07■□□□□ 0.64
Vti1aO89116 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Vti1aO89116 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Vti1aO89116 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vti1aO89116 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.06■□□□□ 0.64
Vti1aO89116 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Vti1aO89116 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vti1aO89116 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vti1aO89116 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vti1aO89116 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vti1aO89116 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vti1aO89116 Gm12382-201ENSMUST00000122005 922 ntBASIC19.06■□□□□ 0.64
Vti1aO89116 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.06■□□□□ 0.64
Vti1aO89116 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Vti1aO89116 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vti1aO89116 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vti1aO89116 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vti1aO89116 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vti1aO89116 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.06■□□□□ 0.64
Vti1aO89116 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vti1aO89116 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Vti1aO89116 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.05■□□□□ 0.64
Vti1aO89116 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
Vti1aO89116 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Vti1aO89116 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC19.05■□□□□ 0.64
Vti1aO89116 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vti1aO89116 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vti1aO89116 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vti1aO89116 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vti1aO89116 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vti1aO89116 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vti1aO89116 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Vti1aO89116 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vti1aO89116 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vti1aO89116 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Vti1aO89116 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Vti1aO89116 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms