Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sh2d1aO88890 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC12.52□□□□□ -0.41
Sh2d1aO88890 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC12.52□□□□□ -0.41
Sh2d1aO88890 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sh2d1aO88890 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sh2d1aO88890 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sh2d1aO88890 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sh2d1aO88890 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Sh2d1aO88890 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Sh2d1aO88890 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sh2d1aO88890 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sh2d1aO88890 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sh2d1aO88890 Gm37194-201ENSMUST00000193092 3031 ntBASIC12.52□□□□□ -0.41
Sh2d1aO88890 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Sh2d1aO88890 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sh2d1aO88890 Tgds-204ENSMUST00000228543 1594 ntBASIC12.52□□□□□ -0.41
Sh2d1aO88890 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sh2d1aO88890 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sh2d1aO88890 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sh2d1aO88890 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sh2d1aO88890 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sh2d1aO88890 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sh2d1aO88890 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sh2d1aO88890 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Sh2d1aO88890 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sh2d1aO88890 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sh2d1aO88890 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sh2d1aO88890 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC12.51□□□□□ -0.41
Sh2d1aO88890 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sh2d1aO88890 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Sh2d1aO88890 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sh2d1aO88890 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sh2d1aO88890 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sh2d1aO88890 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC12.51□□□□□ -0.41
Sh2d1aO88890 Gm27405-201ENSMUST00000184201 112 ntBASIC12.51□□□□□ -0.41
Sh2d1aO88890 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC12.51□□□□□ -0.41
Sh2d1aO88890 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sh2d1aO88890 Gm7291-201ENSMUST00000199147 382 ntBASIC12.51□□□□□ -0.41
Sh2d1aO88890 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC12.51□□□□□ -0.41
Sh2d1aO88890 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sh2d1aO88890 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sh2d1aO88890 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Sh2d1aO88890 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sh2d1aO88890 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sh2d1aO88890 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sh2d1aO88890 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sh2d1aO88890 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC12.51□□□□□ -0.41
Sh2d1aO88890 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sh2d1aO88890 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sh2d1aO88890 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC12.51□□□□□ -0.41
Sh2d1aO88890 Gm5828-201ENSMUST00000071842 1860 ntBASIC12.51□□□□□ -0.41
Sh2d1aO88890 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sh2d1aO88890 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sh2d1aO88890 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sh2d1aO88890 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sh2d1aO88890 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sh2d1aO88890 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC12.5□□□□□ -0.41
Sh2d1aO88890 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC12.5□□□□□ -0.41
Sh2d1aO88890 Gm22325-201ENSMUST00000158904 308 ntBASIC12.5□□□□□ -0.41
Sh2d1aO88890 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC12.5□□□□□ -0.41
Sh2d1aO88890 Gm37563-201ENSMUST00000192580 1513 ntBASIC12.5□□□□□ -0.41
Sh2d1aO88890 Gm38345-201ENSMUST00000192635 1748 ntBASIC12.5□□□□□ -0.41
Sh2d1aO88890 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sh2d1aO88890 Gm45141-201ENSMUST00000206502 1888 ntBASIC12.5□□□□□ -0.41
Sh2d1aO88890 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sh2d1aO88890 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sh2d1aO88890 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
Sh2d1aO88890 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sh2d1aO88890 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sh2d1aO88890 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sh2d1aO88890 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Sh2d1aO88890 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sh2d1aO88890 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Sh2d1aO88890 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sh2d1aO88890 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC12.49□□□□□ -0.41
Sh2d1aO88890 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sh2d1aO88890 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sh2d1aO88890 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sh2d1aO88890 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sh2d1aO88890 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sh2d1aO88890 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sh2d1aO88890 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Sh2d1aO88890 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sh2d1aO88890 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Sh2d1aO88890 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sh2d1aO88890 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC12.49□□□□□ -0.41
Sh2d1aO88890 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sh2d1aO88890 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC12.49□□□□□ -0.41
Sh2d1aO88890 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC12.49□□□□□ -0.41
Sh2d1aO88890 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC12.49□□□□□ -0.41
Sh2d1aO88890 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Sh2d1aO88890 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sh2d1aO88890 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC12.49□□□□□ -0.41
Sh2d1aO88890 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sh2d1aO88890 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sh2d1aO88890 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sh2d1aO88890 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sh2d1aO88890 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sh2d1aO88890 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sh2d1aO88890 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms