Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Hcn1O88704 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.96■□□□□ 0.3
Hcn1O88704 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Hcn1O88704 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Hcn1O88704 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.95■□□□□ 0.3
Hcn1O88704 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Hcn1O88704 Gm27011-201ENSMUST00000182352 972 ntBASIC16.95■□□□□ 0.3
Hcn1O88704 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Hcn1O88704 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hcn1O88704 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Hcn1O88704 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hcn1O88704 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
Hcn1O88704 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hcn1O88704 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hcn1O88704 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hcn1O88704 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hcn1O88704 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hcn1O88704 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
Hcn1O88704 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hcn1O88704 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hcn1O88704 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Hcn1O88704 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hcn1O88704 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hcn1O88704 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hcn1O88704 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.94■□□□□ 0.3
Hcn1O88704 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hcn1O88704 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Hcn1O88704 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.94■□□□□ 0.3
Hcn1O88704 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hcn1O88704 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.94■□□□□ 0.3
Hcn1O88704 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hcn1O88704 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Hcn1O88704 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hcn1O88704 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Hcn1O88704 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hcn1O88704 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hcn1O88704 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Hcn1O88704 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Hcn1O88704 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Hcn1O88704 Gm12527-201ENSMUST00000117967 564 ntBASIC16.93■□□□□ 0.3
Hcn1O88704 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hcn1O88704 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Hcn1O88704 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hcn1O88704 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hcn1O88704 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Hcn1O88704 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hcn1O88704 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Hcn1O88704 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hcn1O88704 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Hcn1O88704 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hcn1O88704 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hcn1O88704 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hcn1O88704 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Hcn1O88704 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.92■□□□□ 0.3
Hcn1O88704 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hcn1O88704 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.92■□□□□ 0.3
Hcn1O88704 Gm20049-201ENSMUST00000219950 730 ntBASIC16.92■□□□□ 0.3
Hcn1O88704 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Hcn1O88704 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Hcn1O88704 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hcn1O88704 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hcn1O88704 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hcn1O88704 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Hcn1O88704 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
Hcn1O88704 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hcn1O88704 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hcn1O88704 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hcn1O88704 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Hcn1O88704 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hcn1O88704 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hcn1O88704 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hcn1O88704 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hcn1O88704 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hcn1O88704 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hcn1O88704 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Hcn1O88704 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hcn1O88704 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hcn1O88704 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hcn1O88704 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hcn1O88704 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Hcn1O88704 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hcn1O88704 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hcn1O88704 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hcn1O88704 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.91■□□□□ 0.3
Hcn1O88704 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hcn1O88704 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Hcn1O88704 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hcn1O88704 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Hcn1O88704 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hcn1O88704 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hcn1O88704 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.9■□□□□ 0.3
Hcn1O88704 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hcn1O88704 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.9■□□□□ 0.3
Hcn1O88704 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hcn1O88704 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Hcn1O88704 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hcn1O88704 Gm44549-201ENSMUST00000208351 577 ntBASIC16.9■□□□□ 0.3
Hcn1O88704 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.9■□□□□ 0.3
Hcn1O88704 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hcn1O88704 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms