Protein–RNA interactions for Protein: O88632

Sema3f, Semaphorin-3F, mousemouse

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3fO88632 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sema3fO88632 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sema3fO88632 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Sema3fO88632 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sema3fO88632 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sema3fO88632 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sema3fO88632 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Sema3fO88632 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Sema3fO88632 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sema3fO88632 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sema3fO88632 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Sema3fO88632 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sema3fO88632 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sema3fO88632 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sema3fO88632 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Sema3fO88632 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Sema3fO88632 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sema3fO88632 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sema3fO88632 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sema3fO88632 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sema3fO88632 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.43■□□□□ 0.86
Sema3fO88632 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sema3fO88632 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sema3fO88632 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sema3fO88632 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC20.42■□□□□ 0.86
Sema3fO88632 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Sema3fO88632 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Sema3fO88632 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Sema3fO88632 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sema3fO88632 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
Sema3fO88632 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.42■□□□□ 0.86
Sema3fO88632 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sema3fO88632 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Sema3fO88632 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sema3fO88632 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.42■□□□□ 0.86
Sema3fO88632 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sema3fO88632 Gm37374-201ENSMUST00000194954 1829 ntBASIC20.41■□□□□ 0.86
Sema3fO88632 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sema3fO88632 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sema3fO88632 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sema3fO88632 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Sema3fO88632 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sema3fO88632 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sema3fO88632 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Sema3fO88632 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sema3fO88632 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sema3fO88632 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sema3fO88632 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sema3fO88632 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
Sema3fO88632 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.4■□□□□ 0.86
Sema3fO88632 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sema3fO88632 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sema3fO88632 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sema3fO88632 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.4■□□□□ 0.86
Sema3fO88632 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
Sema3fO88632 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sema3fO88632 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sema3fO88632 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Sema3fO88632 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sema3fO88632 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sema3fO88632 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Sema3fO88632 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Sema3fO88632 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Sema3fO88632 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Sema3fO88632 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.39■□□□□ 0.85
Sema3fO88632 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC20.39■□□□□ 0.85
Sema3fO88632 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sema3fO88632 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.39■□□□□ 0.85
Sema3fO88632 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Sema3fO88632 Gm29791-202ENSMUST00000207888 369 ntBASIC20.39■□□□□ 0.85
Sema3fO88632 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sema3fO88632 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sema3fO88632 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sema3fO88632 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sema3fO88632 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Sema3fO88632 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC20.39■□□□□ 0.85
Sema3fO88632 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Sema3fO88632 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sema3fO88632 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Sema3fO88632 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sema3fO88632 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sema3fO88632 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Sema3fO88632 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Sema3fO88632 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC20.38■□□□□ 0.85
Sema3fO88632 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sema3fO88632 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sema3fO88632 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sema3fO88632 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Sema3fO88632 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sema3fO88632 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sema3fO88632 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sema3fO88632 Gm4217-201ENSMUST00000182243 1002 ntBASIC20.37■□□□□ 0.85
Sema3fO88632 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC20.37■□□□□ 0.85
Sema3fO88632 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Sema3fO88632 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sema3fO88632 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sema3fO88632 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sema3fO88632 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sema3fO88632 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sema3fO88632 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms