Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cops6O88545 Gm10013-201ENSMUST00000106074 672 ntBASIC21.67■■□□□ 1.06
Cops6O88545 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cops6O88545 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Cops6O88545 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cops6O88545 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC21.67■■□□□ 1.06
Cops6O88545 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC21.67■■□□□ 1.06
Cops6O88545 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Cops6O88545 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC21.67■■□□□ 1.06
Cops6O88545 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cops6O88545 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cops6O88545 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Cops6O88545 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Cops6O88545 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cops6O88545 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cops6O88545 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Cops6O88545 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC21.66■■□□□ 1.06
Cops6O88545 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC21.66■■□□□ 1.06
Cops6O88545 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cops6O88545 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cops6O88545 Gm21362-201ENSMUST00000194272 928 ntBASIC21.66■■□□□ 1.06
Cops6O88545 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
Cops6O88545 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cops6O88545 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cops6O88545 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cops6O88545 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cops6O88545 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Cops6O88545 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cops6O88545 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cops6O88545 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cops6O88545 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cops6O88545 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cops6O88545 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cops6O88545 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC21.65■■□□□ 1.06
Cops6O88545 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Cops6O88545 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC21.65■■□□□ 1.06
Cops6O88545 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC21.65■■□□□ 1.06
Cops6O88545 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cops6O88545 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cops6O88545 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cops6O88545 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cops6O88545 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cops6O88545 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cops6O88545 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cops6O88545 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cops6O88545 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cops6O88545 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cops6O88545 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cops6O88545 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cops6O88545 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cops6O88545 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Cops6O88545 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Cops6O88545 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cops6O88545 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC21.64■■□□□ 1.05
Cops6O88545 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cops6O88545 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cops6O88545 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cops6O88545 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Cops6O88545 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Cops6O88545 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cops6O88545 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cops6O88545 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC21.63■■□□□ 1.05
Cops6O88545 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cops6O88545 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cops6O88545 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cops6O88545 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cops6O88545 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC21.63■■□□□ 1.05
Cops6O88545 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cops6O88545 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cops6O88545 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Cops6O88545 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cops6O88545 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Cops6O88545 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Cops6O88545 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Cops6O88545 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC21.62■■□□□ 1.05
Cops6O88545 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cops6O88545 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cops6O88545 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC21.62■■□□□ 1.05
Cops6O88545 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
Cops6O88545 Gm6728-201ENSMUST00000178117 1065 ntBASIC21.62■■□□□ 1.05
Cops6O88545 AC134329.2-201ENSMUST00000217897 428 ntBASIC21.62■■□□□ 1.05
Cops6O88545 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC21.62■■□□□ 1.05
Cops6O88545 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cops6O88545 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC21.62■■□□□ 1.05
Cops6O88545 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cops6O88545 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cops6O88545 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cops6O88545 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cops6O88545 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cops6O88545 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cops6O88545 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Cops6O88545 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cops6O88545 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cops6O88545 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cops6O88545 Gm22697-201ENSMUST00000175194 63 ntBASIC21.61■■□□□ 1.05
Cops6O88545 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Cops6O88545 Gm35558-201ENSMUST00000222675 2219 ntBASIC21.61■■□□□ 1.05
Cops6O88545 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cops6O88545 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cops6O88545 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms