Protein–RNA interactions for Protein: O88410

Cxcr3, C-X-C chemokine receptor type 3, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr3O88410 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cxcr3O88410 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cxcr3O88410 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cxcr3O88410 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Cxcr3O88410 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Cxcr3O88410 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.76■□□□□ 0.43
Cxcr3O88410 Gm7977-201ENSMUST00000193787 748 ntBASIC17.76■□□□□ 0.43
Cxcr3O88410 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.76■□□□□ 0.43
Cxcr3O88410 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cxcr3O88410 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cxcr3O88410 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Cxcr3O88410 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cxcr3O88410 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cxcr3O88410 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cxcr3O88410 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cxcr3O88410 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cxcr3O88410 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cxcr3O88410 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cxcr3O88410 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cxcr3O88410 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cxcr3O88410 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cxcr3O88410 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cxcr3O88410 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Cxcr3O88410 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cxcr3O88410 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cxcr3O88410 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cxcr3O88410 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.75■□□□□ 0.43
Cxcr3O88410 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cxcr3O88410 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cxcr3O88410 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.75■□□□□ 0.43
Cxcr3O88410 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.75■□□□□ 0.43
Cxcr3O88410 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cxcr3O88410 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cxcr3O88410 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.75■□□□□ 0.43
Cxcr3O88410 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cxcr3O88410 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cxcr3O88410 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.75■□□□□ 0.43
Cxcr3O88410 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cxcr3O88410 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cxcr3O88410 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cxcr3O88410 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cxcr3O88410 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cxcr3O88410 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cxcr3O88410 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cxcr3O88410 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cxcr3O88410 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Cxcr3O88410 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Cxcr3O88410 Gm13836-201ENSMUST00000121159 501 ntBASIC17.74■□□□□ 0.43
Cxcr3O88410 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cxcr3O88410 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Cxcr3O88410 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cxcr3O88410 Gm43183-201ENSMUST00000200632 547 ntBASIC17.74■□□□□ 0.43
Cxcr3O88410 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.74■□□□□ 0.43
Cxcr3O88410 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cxcr3O88410 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.74■□□□□ 0.43
Cxcr3O88410 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Cxcr3O88410 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cxcr3O88410 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Cxcr3O88410 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.74■□□□□ 0.43
Cxcr3O88410 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.74■□□□□ 0.43
Cxcr3O88410 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cxcr3O88410 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cxcr3O88410 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Cxcr3O88410 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cxcr3O88410 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cxcr3O88410 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cxcr3O88410 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Cxcr3O88410 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Cxcr3O88410 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cxcr3O88410 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cxcr3O88410 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cxcr3O88410 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cxcr3O88410 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cxcr3O88410 Gm10418-201ENSMUST00000100943 576 ntBASIC17.73■□□□□ 0.43
Cxcr3O88410 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.73■□□□□ 0.43
Cxcr3O88410 Mir1199-201ENSMUST00000117015 119 ntBASIC17.73■□□□□ 0.43
Cxcr3O88410 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cxcr3O88410 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cxcr3O88410 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Cxcr3O88410 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cxcr3O88410 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cxcr3O88410 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cxcr3O88410 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cxcr3O88410 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cxcr3O88410 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.72■□□□□ 0.43
Cxcr3O88410 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cxcr3O88410 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cxcr3O88410 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cxcr3O88410 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cxcr3O88410 Gm12382-201ENSMUST00000122005 922 ntBASIC17.72■□□□□ 0.43
Cxcr3O88410 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cxcr3O88410 Gm37292-201ENSMUST00000192062 758 ntBASIC17.72■□□□□ 0.43
Cxcr3O88410 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.72■□□□□ 0.43
Cxcr3O88410 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cxcr3O88410 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cxcr3O88410 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cxcr3O88410 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cxcr3O88410 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cxcr3O88410 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Cxcr3O88410 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms