Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tgfbr3O88393 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
Tgfbr3O88393 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tgfbr3O88393 Gm13401-201ENSMUST00000117074 291 ntBASIC16.83■□□□□ 0.28
Tgfbr3O88393 Gm9103-201ENSMUST00000119371 405 ntBASIC16.83■□□□□ 0.28
Tgfbr3O88393 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tgfbr3O88393 Gm25016-201ENSMUST00000158399 131 ntBASIC16.83■□□□□ 0.28
Tgfbr3O88393 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.83■□□□□ 0.28
Tgfbr3O88393 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.83■□□□□ 0.28
Tgfbr3O88393 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tgfbr3O88393 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tgfbr3O88393 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tgfbr3O88393 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Tgfbr3O88393 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tgfbr3O88393 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Tgfbr3O88393 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tgfbr3O88393 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.82■□□□□ 0.28
Tgfbr3O88393 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tgfbr3O88393 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.82■□□□□ 0.28
Tgfbr3O88393 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tgfbr3O88393 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tgfbr3O88393 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tgfbr3O88393 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tgfbr3O88393 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tgfbr3O88393 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tgfbr3O88393 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tgfbr3O88393 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tgfbr3O88393 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Tgfbr3O88393 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tgfbr3O88393 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.82■□□□□ 0.28
Tgfbr3O88393 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.82■□□□□ 0.28
Tgfbr3O88393 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tgfbr3O88393 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tgfbr3O88393 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tgfbr3O88393 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tgfbr3O88393 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Tgfbr3O88393 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tgfbr3O88393 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.81■□□□□ 0.28
Tgfbr3O88393 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Tgfbr3O88393 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tgfbr3O88393 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tgfbr3O88393 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.81■□□□□ 0.28
Tgfbr3O88393 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.81■□□□□ 0.28
Tgfbr3O88393 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tgfbr3O88393 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tgfbr3O88393 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.81■□□□□ 0.28
Tgfbr3O88393 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.81■□□□□ 0.28
Tgfbr3O88393 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tgfbr3O88393 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Tgfbr3O88393 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tgfbr3O88393 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Tgfbr3O88393 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tgfbr3O88393 Gm10418-201ENSMUST00000100943 576 ntBASIC16.8■□□□□ 0.28
Tgfbr3O88393 Gm13474-201ENSMUST00000122466 815 ntBASIC16.8■□□□□ 0.28
Tgfbr3O88393 Gm7284-201ENSMUST00000131667 944 ntBASIC16.8■□□□□ 0.28
Tgfbr3O88393 Gm17661-201ENSMUST00000170317 270 ntBASIC16.8■□□□□ 0.28
Tgfbr3O88393 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tgfbr3O88393 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tgfbr3O88393 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tgfbr3O88393 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.8■□□□□ 0.28
Tgfbr3O88393 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tgfbr3O88393 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tgfbr3O88393 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tgfbr3O88393 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tgfbr3O88393 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Tgfbr3O88393 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tgfbr3O88393 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.8■□□□□ 0.28
Tgfbr3O88393 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tgfbr3O88393 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tgfbr3O88393 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Tgfbr3O88393 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tgfbr3O88393 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.79■□□□□ 0.28
Tgfbr3O88393 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tgfbr3O88393 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Tgfbr3O88393 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Tgfbr3O88393 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tgfbr3O88393 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.79■□□□□ 0.28
Tgfbr3O88393 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Tgfbr3O88393 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tgfbr3O88393 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tgfbr3O88393 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tgfbr3O88393 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tgfbr3O88393 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Tgfbr3O88393 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tgfbr3O88393 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tgfbr3O88393 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.78■□□□□ 0.28
Tgfbr3O88393 Gm7370-201ENSMUST00000219471 767 ntBASIC16.78■□□□□ 0.28
Tgfbr3O88393 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tgfbr3O88393 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Tgfbr3O88393 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Tgfbr3O88393 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tgfbr3O88393 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tgfbr3O88393 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tgfbr3O88393 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Tgfbr3O88393 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Tgfbr3O88393 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tgfbr3O88393 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Tgfbr3O88393 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tgfbr3O88393 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Tgfbr3O88393 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms