Protein–RNA interactions for Protein: O70309

Itgb5, Integrin beta-5, mousemouse

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb5O70309 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Itgb5O70309 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Itgb5O70309 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Itgb5O70309 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Itgb5O70309 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Itgb5O70309 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Itgb5O70309 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Itgb5O70309 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Itgb5O70309 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Itgb5O70309 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Itgb5O70309 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.68■□□□□ 0.74
Itgb5O70309 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Itgb5O70309 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Itgb5O70309 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.68■□□□□ 0.74
Itgb5O70309 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Itgb5O70309 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Itgb5O70309 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Itgb5O70309 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Itgb5O70309 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Itgb5O70309 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19.67■□□□□ 0.74
Itgb5O70309 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Itgb5O70309 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.67■□□□□ 0.74
Itgb5O70309 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.67■□□□□ 0.74
Itgb5O70309 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Itgb5O70309 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.67■□□□□ 0.74
Itgb5O70309 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.67■□□□□ 0.74
Itgb5O70309 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Itgb5O70309 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Itgb5O70309 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Itgb5O70309 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Itgb5O70309 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Itgb5O70309 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Itgb5O70309 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Itgb5O70309 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Itgb5O70309 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Itgb5O70309 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Itgb5O70309 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Itgb5O70309 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Itgb5O70309 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Itgb5O70309 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Itgb5O70309 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Itgb5O70309 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Itgb5O70309 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.66■□□□□ 0.74
Itgb5O70309 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Itgb5O70309 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.66■□□□□ 0.74
Itgb5O70309 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Itgb5O70309 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Itgb5O70309 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Itgb5O70309 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.66■□□□□ 0.74
Itgb5O70309 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Itgb5O70309 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Itgb5O70309 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Itgb5O70309 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Itgb5O70309 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Itgb5O70309 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Itgb5O70309 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Itgb5O70309 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.65■□□□□ 0.74
Itgb5O70309 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Itgb5O70309 Gm27463-201ENSMUST00000183569 57 ntBASIC19.65■□□□□ 0.74
Itgb5O70309 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Itgb5O70309 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Itgb5O70309 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Itgb5O70309 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Itgb5O70309 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Itgb5O70309 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Itgb5O70309 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Itgb5O70309 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Itgb5O70309 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Itgb5O70309 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Itgb5O70309 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Itgb5O70309 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Itgb5O70309 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.64■□□□□ 0.73
Itgb5O70309 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Itgb5O70309 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Itgb5O70309 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Itgb5O70309 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Itgb5O70309 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Itgb5O70309 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Itgb5O70309 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Itgb5O70309 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Itgb5O70309 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Itgb5O70309 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.64■□□□□ 0.73
Itgb5O70309 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Itgb5O70309 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Itgb5O70309 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Itgb5O70309 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Itgb5O70309 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Itgb5O70309 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Itgb5O70309 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Itgb5O70309 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Itgb5O70309 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Itgb5O70309 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Itgb5O70309 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Itgb5O70309 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.63■□□□□ 0.73
Itgb5O70309 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.63■□□□□ 0.73
Itgb5O70309 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Itgb5O70309 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Itgb5O70309 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Itgb5O70309 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Itgb5O70309 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms