Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pdlim3O70209 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pdlim3O70209 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pdlim3O70209 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pdlim3O70209 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pdlim3O70209 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Pdlim3O70209 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.08■□□□□ 0.16
Pdlim3O70209 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Pdlim3O70209 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Pdlim3O70209 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pdlim3O70209 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Pdlim3O70209 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pdlim3O70209 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.08■□□□□ 0.16
Pdlim3O70209 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pdlim3O70209 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pdlim3O70209 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Pdlim3O70209 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pdlim3O70209 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pdlim3O70209 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pdlim3O70209 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pdlim3O70209 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pdlim3O70209 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.07■□□□□ 0.16
Pdlim3O70209 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pdlim3O70209 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pdlim3O70209 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pdlim3O70209 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pdlim3O70209 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pdlim3O70209 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.07■□□□□ 0.16
Pdlim3O70209 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pdlim3O70209 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pdlim3O70209 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Pdlim3O70209 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pdlim3O70209 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.06■□□□□ 0.16
Pdlim3O70209 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pdlim3O70209 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pdlim3O70209 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.06■□□□□ 0.16
Pdlim3O70209 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.06■□□□□ 0.16
Pdlim3O70209 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pdlim3O70209 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pdlim3O70209 Gm21168-201ENSMUST00000199646 1096 ntBASIC16.06■□□□□ 0.16
Pdlim3O70209 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pdlim3O70209 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.06■□□□□ 0.16
Pdlim3O70209 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.06■□□□□ 0.16
Pdlim3O70209 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pdlim3O70209 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pdlim3O70209 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pdlim3O70209 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pdlim3O70209 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Pdlim3O70209 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pdlim3O70209 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Pdlim3O70209 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pdlim3O70209 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Pdlim3O70209 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.05■□□□□ 0.16
Pdlim3O70209 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pdlim3O70209 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Pdlim3O70209 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pdlim3O70209 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Pdlim3O70209 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.05■□□□□ 0.16
Pdlim3O70209 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pdlim3O70209 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pdlim3O70209 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
Pdlim3O70209 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Pdlim3O70209 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pdlim3O70209 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pdlim3O70209 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pdlim3O70209 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC16.04■□□□□ 0.16
Pdlim3O70209 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.04■□□□□ 0.16
Pdlim3O70209 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Pdlim3O70209 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pdlim3O70209 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pdlim3O70209 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pdlim3O70209 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pdlim3O70209 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.04■□□□□ 0.16
Pdlim3O70209 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pdlim3O70209 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.04■□□□□ 0.16
Pdlim3O70209 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pdlim3O70209 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pdlim3O70209 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.03■□□□□ 0.16
Pdlim3O70209 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.03■□□□□ 0.16
Pdlim3O70209 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pdlim3O70209 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pdlim3O70209 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Pdlim3O70209 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pdlim3O70209 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.03■□□□□ 0.16
Pdlim3O70209 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Pdlim3O70209 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.03■□□□□ 0.16
Pdlim3O70209 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Pdlim3O70209 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.03■□□□□ 0.16
Pdlim3O70209 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.03■□□□□ 0.16
Pdlim3O70209 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Pdlim3O70209 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pdlim3O70209 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pdlim3O70209 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pdlim3O70209 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pdlim3O70209 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pdlim3O70209 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Pdlim3O70209 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pdlim3O70209 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pdlim3O70209 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pdlim3O70209 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms