Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Gm12896-201ENSMUST00000118430 226 ntBASIC16.78■□□□□ 0.28
Rdh5O55240 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Rdh5O55240 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rdh5O55240 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rdh5O55240 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rdh5O55240 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rdh5O55240 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rdh5O55240 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rdh5O55240 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rdh5O55240 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Rdh5O55240 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rdh5O55240 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rdh5O55240 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rdh5O55240 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rdh5O55240 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.77■□□□□ 0.28
Rdh5O55240 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rdh5O55240 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rdh5O55240 Idnk-204ENSMUST00000226010 1898 ntBASIC16.77■□□□□ 0.27
Rdh5O55240 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rdh5O55240 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
Rdh5O55240 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rdh5O55240 Dio3-201ENSMUST00000097228 1449 ntBASIC16.77■□□□□ 0.27
Rdh5O55240 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rdh5O55240 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rdh5O55240 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.76■□□□□ 0.27
Rdh5O55240 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rdh5O55240 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rdh5O55240 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rdh5O55240 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rdh5O55240 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.76■□□□□ 0.27
Rdh5O55240 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.76■□□□□ 0.27
Rdh5O55240 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Rdh5O55240 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
Rdh5O55240 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rdh5O55240 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rdh5O55240 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rdh5O55240 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rdh5O55240 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rdh5O55240 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rdh5O55240 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Rdh5O55240 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rdh5O55240 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rdh5O55240 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rdh5O55240 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rdh5O55240 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rdh5O55240 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.75■□□□□ 0.27
Rdh5O55240 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.75■□□□□ 0.27
Rdh5O55240 Mtag2-201ENSMUST00000058665 714 ntBASIC16.75■□□□□ 0.27
Rdh5O55240 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.75■□□□□ 0.27
Rdh5O55240 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rdh5O55240 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Rdh5O55240 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rdh5O55240 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rdh5O55240 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.75■□□□□ 0.27
Rdh5O55240 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rdh5O55240 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rdh5O55240 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rdh5O55240 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rdh5O55240 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.74■□□□□ 0.27
Rdh5O55240 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rdh5O55240 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rdh5O55240 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.74■□□□□ 0.27
Rdh5O55240 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rdh5O55240 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.74■□□□□ 0.27
Rdh5O55240 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rdh5O55240 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rdh5O55240 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Rdh5O55240 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.74■□□□□ 0.27
Rdh5O55240 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.73■□□□□ 0.27
Rdh5O55240 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rdh5O55240 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.73■□□□□ 0.27
Rdh5O55240 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rdh5O55240 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rdh5O55240 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rdh5O55240 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rdh5O55240 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rdh5O55240 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Rdh5O55240 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.73■□□□□ 0.27
Rdh5O55240 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.73■□□□□ 0.27
Rdh5O55240 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rdh5O55240 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rdh5O55240 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Rdh5O55240 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rdh5O55240 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rdh5O55240 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rdh5O55240 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rdh5O55240 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rdh5O55240 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.73■□□□□ 0.27
Rdh5O55240 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rdh5O55240 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rdh5O55240 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rdh5O55240 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rdh5O55240 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.72■□□□□ 0.27
Rdh5O55240 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rdh5O55240 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rdh5O55240 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rdh5O55240 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.72■□□□□ 0.27
Rdh5O55240 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rdh5O55240 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rdh5O55240 Gm13168-201ENSMUST00000121771 632 ntBASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms