Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpl35aO55142 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC13.19□□□□□ -0.3
Rpl35aO55142 Gm5643-201ENSMUST00000117081 966 ntBASIC13.19□□□□□ -0.3
Rpl35aO55142 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rpl35aO55142 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Rpl35aO55142 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpl35aO55142 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpl35aO55142 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpl35aO55142 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpl35aO55142 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpl35aO55142 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rpl35aO55142 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpl35aO55142 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpl35aO55142 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpl35aO55142 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpl35aO55142 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpl35aO55142 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl35aO55142 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Rpl35aO55142 Gm38308-201ENSMUST00000194934 1809 ntBASIC13.18□□□□□ -0.3
Rpl35aO55142 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl35aO55142 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl35aO55142 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl35aO55142 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl35aO55142 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC13.18□□□□□ -0.3
Rpl35aO55142 Alkbh1-212ENSMUST00000185301 408 ntBASIC13.18□□□□□ -0.3
Rpl35aO55142 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl35aO55142 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC13.18□□□□□ -0.3
Rpl35aO55142 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC13.18□□□□□ -0.3
Rpl35aO55142 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl35aO55142 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC13.18□□□□□ -0.3
Rpl35aO55142 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl35aO55142 Gm44544-201ENSMUST00000207052 1844 ntBASIC13.18□□□□□ -0.3
Rpl35aO55142 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Rpl35aO55142 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl35aO55142 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl35aO55142 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpl35aO55142 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rpl35aO55142 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rpl35aO55142 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpl35aO55142 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC13.17□□□□□ -0.3
Rpl35aO55142 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpl35aO55142 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
Rpl35aO55142 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Rpl35aO55142 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Rpl35aO55142 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rpl35aO55142 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rpl35aO55142 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpl35aO55142 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rpl35aO55142 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpl35aO55142 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rpl35aO55142 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Rpl35aO55142 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpl35aO55142 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpl35aO55142 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpl35aO55142 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpl35aO55142 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC13.16□□□□□ -0.3
Rpl35aO55142 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpl35aO55142 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rpl35aO55142 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Rpl35aO55142 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC13.16□□□□□ -0.3
Rpl35aO55142 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rpl35aO55142 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpl35aO55142 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpl35aO55142 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpl35aO55142 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpl35aO55142 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpl35aO55142 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Rpl35aO55142 Gm38345-201ENSMUST00000192635 1748 ntBASIC13.16□□□□□ -0.3
Rpl35aO55142 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpl35aO55142 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpl35aO55142 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rpl35aO55142 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpl35aO55142 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rpl35aO55142 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpl35aO55142 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpl35aO55142 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Rpl35aO55142 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Rpl35aO55142 AC121961.1-201ENSMUST00000218594 1779 ntBASIC13.15□□□□□ -0.3
Rpl35aO55142 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC13.15□□□□□ -0.3
Rpl35aO55142 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Rpl35aO55142 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC13.15□□□□□ -0.3
Rpl35aO55142 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC13.15□□□□□ -0.3
Rpl35aO55142 H2-K2-201ENSMUST00000174250 1049 ntBASIC13.15□□□□□ -0.3
Rpl35aO55142 Gm38285-201ENSMUST00000192928 922 ntBASIC13.15□□□□□ -0.3
Rpl35aO55142 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC13.15□□□□□ -0.3
Rpl35aO55142 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC13.15□□□□□ -0.3
Rpl35aO55142 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC13.15□□□□□ -0.3
Rpl35aO55142 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpl35aO55142 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpl35aO55142 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpl35aO55142 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpl35aO55142 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpl35aO55142 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpl35aO55142 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpl35aO55142 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Rpl35aO55142 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
Rpl35aO55142 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpl35aO55142 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC13.14□□□□□ -0.31
Rpl35aO55142 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rpl35aO55142 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms