Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trdmt1O55055 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trdmt1O55055 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trdmt1O55055 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trdmt1O55055 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trdmt1O55055 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trdmt1O55055 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Trdmt1O55055 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trdmt1O55055 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trdmt1O55055 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trdmt1O55055 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trdmt1O55055 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trdmt1O55055 Gm17661-201ENSMUST00000170317 270 ntBASIC19.54■□□□□ 0.72
Trdmt1O55055 Gm9731-201ENSMUST00000209480 747 ntBASIC19.54■□□□□ 0.72
Trdmt1O55055 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trdmt1O55055 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trdmt1O55055 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trdmt1O55055 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trdmt1O55055 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trdmt1O55055 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trdmt1O55055 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.53■□□□□ 0.72
Trdmt1O55055 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.53■□□□□ 0.72
Trdmt1O55055 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trdmt1O55055 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.53■□□□□ 0.72
Trdmt1O55055 Gm9103-201ENSMUST00000119371 405 ntBASIC19.53■□□□□ 0.72
Trdmt1O55055 Gm27389-201ENSMUST00000183622 195 ntBASIC19.53■□□□□ 0.72
Trdmt1O55055 Mir1668-201ENSMUST00000184114 107 ntBASIC19.53■□□□□ 0.72
Trdmt1O55055 Il3ra-202ENSMUST00000223589 738 ntBASIC19.53■□□□□ 0.72
Trdmt1O55055 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Trdmt1O55055 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trdmt1O55055 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trdmt1O55055 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trdmt1O55055 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.53■□□□□ 0.72
Trdmt1O55055 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trdmt1O55055 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trdmt1O55055 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trdmt1O55055 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trdmt1O55055 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trdmt1O55055 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trdmt1O55055 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trdmt1O55055 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.52■□□□□ 0.72
Trdmt1O55055 Gm37025-201ENSMUST00000195159 829 ntBASIC19.52■□□□□ 0.72
Trdmt1O55055 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.52■□□□□ 0.72
Trdmt1O55055 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trdmt1O55055 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Trdmt1O55055 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Trdmt1O55055 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.52■□□□□ 0.71
Trdmt1O55055 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trdmt1O55055 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trdmt1O55055 Gm7284-201ENSMUST00000131667 944 ntBASIC19.51■□□□□ 0.71
Trdmt1O55055 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.51■□□□□ 0.71
Trdmt1O55055 Gm5587-201ENSMUST00000206270 674 ntBASIC19.51■□□□□ 0.71
Trdmt1O55055 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trdmt1O55055 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trdmt1O55055 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Trdmt1O55055 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trdmt1O55055 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trdmt1O55055 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Trdmt1O55055 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trdmt1O55055 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Trdmt1O55055 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trdmt1O55055 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trdmt1O55055 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trdmt1O55055 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trdmt1O55055 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trdmt1O55055 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trdmt1O55055 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trdmt1O55055 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Trdmt1O55055 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC19.5■□□□□ 0.71
Trdmt1O55055 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Trdmt1O55055 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trdmt1O55055 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Trdmt1O55055 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trdmt1O55055 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trdmt1O55055 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trdmt1O55055 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trdmt1O55055 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
Trdmt1O55055 AC120002.2-201ENSMUST00000220205 773 ntBASIC19.49■□□□□ 0.71
Trdmt1O55055 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trdmt1O55055 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trdmt1O55055 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trdmt1O55055 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trdmt1O55055 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trdmt1O55055 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trdmt1O55055 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC19.48■□□□□ 0.71
Trdmt1O55055 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trdmt1O55055 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trdmt1O55055 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
Trdmt1O55055 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trdmt1O55055 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trdmt1O55055 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trdmt1O55055 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trdmt1O55055 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trdmt1O55055 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
Trdmt1O55055 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Trdmt1O55055 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.47■□□□□ 0.71
Trdmt1O55055 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.47■□□□□ 0.71
Trdmt1O55055 Gm7213-201ENSMUST00000215977 950 ntBASIC19.47■□□□□ 0.71
Trdmt1O55055 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC19.47■□□□□ 0.71
Trdmt1O55055 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms