Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SncaO55042 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
SncaO55042 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SncaO55042 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
SncaO55042 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SncaO55042 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SncaO55042 Gm22325-201ENSMUST00000158904 308 ntBASIC14.68□□□□□ -0.06
SncaO55042 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
SncaO55042 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC14.68□□□□□ -0.06
SncaO55042 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SncaO55042 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SncaO55042 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SncaO55042 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SncaO55042 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
SncaO55042 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SncaO55042 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SncaO55042 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.68□□□□□ -0.06
SncaO55042 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SncaO55042 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.68□□□□□ -0.06
SncaO55042 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SncaO55042 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SncaO55042 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SncaO55042 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SncaO55042 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SncaO55042 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SncaO55042 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SncaO55042 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SncaO55042 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SncaO55042 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC14.67□□□□□ -0.06
SncaO55042 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SncaO55042 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SncaO55042 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SncaO55042 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.67□□□□□ -0.06
SncaO55042 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SncaO55042 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SncaO55042 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SncaO55042 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SncaO55042 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SncaO55042 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SncaO55042 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SncaO55042 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SncaO55042 Gm10655-201ENSMUST00000098658 1397 ntBASIC14.66□□□□□ -0.06
SncaO55042 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.66□□□□□ -0.06
SncaO55042 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC14.66□□□□□ -0.06
SncaO55042 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SncaO55042 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SncaO55042 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SncaO55042 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SncaO55042 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SncaO55042 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
SncaO55042 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SncaO55042 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SncaO55042 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SncaO55042 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SncaO55042 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SncaO55042 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SncaO55042 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SncaO55042 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SncaO55042 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SncaO55042 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SncaO55042 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SncaO55042 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
SncaO55042 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SncaO55042 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SncaO55042 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SncaO55042 Gm10493-201ENSMUST00000097270 612 ntBASIC14.65□□□□□ -0.06
SncaO55042 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.65□□□□□ -0.06
SncaO55042 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SncaO55042 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SncaO55042 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
SncaO55042 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.07
SncaO55042 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SncaO55042 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SncaO55042 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SncaO55042 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SncaO55042 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SncaO55042 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SncaO55042 Gm6420-201ENSMUST00000193885 723 ntBASIC14.64□□□□□ -0.07
SncaO55042 AC099934.2-201ENSMUST00000196389 70 ntBASIC14.64□□□□□ -0.07
SncaO55042 AC156953.1-201ENSMUST00000196953 70 ntBASIC14.64□□□□□ -0.07
SncaO55042 AC157822.2-201ENSMUST00000200291 70 ntBASIC14.64□□□□□ -0.07
SncaO55042 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
SncaO55042 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
SncaO55042 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SncaO55042 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SncaO55042 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SncaO55042 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SncaO55042 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SncaO55042 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SncaO55042 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SncaO55042 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SncaO55042 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SncaO55042 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SncaO55042 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SncaO55042 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.63□□□□□ -0.07
SncaO55042 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SncaO55042 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.63□□□□□ -0.07
SncaO55042 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SncaO55042 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
SncaO55042 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms