Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prom1O54990 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prom1O54990 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prom1O54990 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC19.57■□□□□ 0.72
Prom1O54990 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prom1O54990 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Prom1O54990 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Prom1O54990 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Prom1O54990 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Prom1O54990 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Prom1O54990 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Prom1O54990 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Prom1O54990 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.56■□□□□ 0.72
Prom1O54990 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.56■□□□□ 0.72
Prom1O54990 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC19.56■□□□□ 0.72
Prom1O54990 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Prom1O54990 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Prom1O54990 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Prom1O54990 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Prom1O54990 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prom1O54990 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prom1O54990 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prom1O54990 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Prom1O54990 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
Prom1O54990 AC154471.1-201ENSMUST00000224418 436 ntBASIC19.55■□□□□ 0.72
Prom1O54990 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prom1O54990 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prom1O54990 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Prom1O54990 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prom1O54990 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prom1O54990 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prom1O54990 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.55■□□□□ 0.72
Prom1O54990 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prom1O54990 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prom1O54990 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prom1O54990 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prom1O54990 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prom1O54990 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Prom1O54990 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Prom1O54990 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Prom1O54990 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Prom1O54990 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Prom1O54990 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Prom1O54990 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC19.54■□□□□ 0.72
Prom1O54990 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Prom1O54990 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
Prom1O54990 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Prom1O54990 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Prom1O54990 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Prom1O54990 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Prom1O54990 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Prom1O54990 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Prom1O54990 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Prom1O54990 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Prom1O54990 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Prom1O54990 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Prom1O54990 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Prom1O54990 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Prom1O54990 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Prom1O54990 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC19.53■□□□□ 0.72
Prom1O54990 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Prom1O54990 Ank2-226ENSMUST00000189368 339 ntBASIC19.53■□□□□ 0.72
Prom1O54990 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Prom1O54990 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.53■□□□□ 0.72
Prom1O54990 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Prom1O54990 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.53■□□□□ 0.72
Prom1O54990 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.52■□□□□ 0.72
Prom1O54990 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Prom1O54990 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Prom1O54990 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.52■□□□□ 0.72
Prom1O54990 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Prom1O54990 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Prom1O54990 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Prom1O54990 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Prom1O54990 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC19.52■□□□□ 0.72
Prom1O54990 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.52■□□□□ 0.72
Prom1O54990 Gm29791-202ENSMUST00000207888 369 ntBASIC19.52■□□□□ 0.72
Prom1O54990 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Prom1O54990 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Prom1O54990 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Prom1O54990 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Prom1O54990 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Prom1O54990 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.52■□□□□ 0.71
Prom1O54990 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Prom1O54990 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Prom1O54990 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Prom1O54990 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Prom1O54990 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Prom1O54990 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.51■□□□□ 0.71
Prom1O54990 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Prom1O54990 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Prom1O54990 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Prom1O54990 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Prom1O54990 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Prom1O54990 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Prom1O54990 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Prom1O54990 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.51■□□□□ 0.71
Prom1O54990 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Prom1O54990 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.51■□□□□ 0.71
Prom1O54990 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms