Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Limk2O54785 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Limk2O54785 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Limk2O54785 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.97■□□□□ 0.47
Limk2O54785 Idnk-204ENSMUST00000226010 1898 ntBASIC17.97■□□□□ 0.47
Limk2O54785 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Limk2O54785 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Limk2O54785 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Limk2O54785 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Limk2O54785 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
Limk2O54785 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.96■□□□□ 0.47
Limk2O54785 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Limk2O54785 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Limk2O54785 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Limk2O54785 Gm10418-201ENSMUST00000100943 576 ntBASIC17.96■□□□□ 0.47
Limk2O54785 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Limk2O54785 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.96■□□□□ 0.47
Limk2O54785 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Limk2O54785 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Limk2O54785 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.96■□□□□ 0.47
Limk2O54785 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Limk2O54785 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Limk2O54785 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Limk2O54785 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Limk2O54785 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Limk2O54785 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Limk2O54785 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Limk2O54785 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Limk2O54785 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Limk2O54785 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Limk2O54785 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Limk2O54785 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Limk2O54785 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.95■□□□□ 0.46
Limk2O54785 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Limk2O54785 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Limk2O54785 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Limk2O54785 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Limk2O54785 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
Limk2O54785 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.95■□□□□ 0.46
Limk2O54785 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.95■□□□□ 0.46
Limk2O54785 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.95■□□□□ 0.46
Limk2O54785 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Limk2O54785 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Limk2O54785 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Limk2O54785 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Limk2O54785 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Limk2O54785 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Limk2O54785 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.94■□□□□ 0.46
Limk2O54785 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Limk2O54785 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Limk2O54785 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Limk2O54785 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Limk2O54785 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Limk2O54785 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Limk2O54785 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Limk2O54785 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Limk2O54785 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Limk2O54785 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.94■□□□□ 0.46
Limk2O54785 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Limk2O54785 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Limk2O54785 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Limk2O54785 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Limk2O54785 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.94■□□□□ 0.46
Limk2O54785 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Limk2O54785 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Limk2O54785 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Limk2O54785 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
Limk2O54785 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Limk2O54785 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Limk2O54785 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.93■□□□□ 0.46
Limk2O54785 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Limk2O54785 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Limk2O54785 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.93■□□□□ 0.46
Limk2O54785 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.93■□□□□ 0.46
Limk2O54785 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Limk2O54785 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.93■□□□□ 0.46
Limk2O54785 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Limk2O54785 Gm29791-202ENSMUST00000207888 369 ntBASIC17.93■□□□□ 0.46
Limk2O54785 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Limk2O54785 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Limk2O54785 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Limk2O54785 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.93■□□□□ 0.46
Limk2O54785 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Limk2O54785 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Limk2O54785 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Limk2O54785 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Limk2O54785 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Limk2O54785 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Limk2O54785 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Limk2O54785 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Limk2O54785 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Limk2O54785 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Limk2O54785 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Limk2O54785 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Limk2O54785 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Limk2O54785 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Limk2O54785 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Limk2O54785 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.92■□□□□ 0.46
Limk2O54785 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.92■□□□□ 0.46
Limk2O54785 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms