Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Sdc4O35988 Gm3375-201ENSMUST00000203929 796 ntBASIC18.24■□□□□ 0.51
Sdc4O35988 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.24■□□□□ 0.51
Sdc4O35988 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.24■□□□□ 0.51
Sdc4O35988 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sdc4O35988 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
Sdc4O35988 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Sdc4O35988 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.24■□□□□ 0.51
Sdc4O35988 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sdc4O35988 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sdc4O35988 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sdc4O35988 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sdc4O35988 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.23■□□□□ 0.51
Sdc4O35988 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Sdc4O35988 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sdc4O35988 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sdc4O35988 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.23■□□□□ 0.51
Sdc4O35988 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Sdc4O35988 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sdc4O35988 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Sdc4O35988 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sdc4O35988 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Sdc4O35988 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sdc4O35988 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sdc4O35988 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sdc4O35988 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sdc4O35988 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.22■□□□□ 0.51
Sdc4O35988 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sdc4O35988 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Sdc4O35988 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.22■□□□□ 0.51
Sdc4O35988 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Sdc4O35988 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Sdc4O35988 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sdc4O35988 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sdc4O35988 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sdc4O35988 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sdc4O35988 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sdc4O35988 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sdc4O35988 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sdc4O35988 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sdc4O35988 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sdc4O35988 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sdc4O35988 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sdc4O35988 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sdc4O35988 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sdc4O35988 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sdc4O35988 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sdc4O35988 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.21■□□□□ 0.51
Sdc4O35988 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Sdc4O35988 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Sdc4O35988 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Sdc4O35988 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sdc4O35988 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.21■□□□□ 0.51
Sdc4O35988 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Sdc4O35988 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
Sdc4O35988 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Sdc4O35988 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Sdc4O35988 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sdc4O35988 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sdc4O35988 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sdc4O35988 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Sdc4O35988 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sdc4O35988 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Sdc4O35988 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sdc4O35988 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Sdc4O35988 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sdc4O35988 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sdc4O35988 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sdc4O35988 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sdc4O35988 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sdc4O35988 Gm6433-201ENSMUST00000118634 875 ntBASIC18.2■□□□□ 0.5
Sdc4O35988 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Sdc4O35988 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.2■□□□□ 0.5
Sdc4O35988 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.2■□□□□ 0.5
Sdc4O35988 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.2■□□□□ 0.5
Sdc4O35988 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.2■□□□□ 0.5
Sdc4O35988 Gm43799-201ENSMUST00000201845 579 ntBASIC18.2■□□□□ 0.5
Sdc4O35988 Gm4974-201ENSMUST00000209974 875 ntBASIC18.2■□□□□ 0.5
Sdc4O35988 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sdc4O35988 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sdc4O35988 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.2■□□□□ 0.5
Sdc4O35988 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sdc4O35988 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sdc4O35988 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sdc4O35988 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sdc4O35988 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Sdc4O35988 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sdc4O35988 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sdc4O35988 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sdc4O35988 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sdc4O35988 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.19■□□□□ 0.5
Sdc4O35988 Gm29791-202ENSMUST00000207888 369 ntBASIC18.19■□□□□ 0.5
Sdc4O35988 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sdc4O35988 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sdc4O35988 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sdc4O35988 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sdc4O35988 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sdc4O35988 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sdc4O35988 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sdc4O35988 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms