Protein–RNA interactions for Protein: O35874

Slc1a4, Neutral amino acid transporter A, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a4O35874 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slc1a4O35874 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slc1a4O35874 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Slc1a4O35874 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slc1a4O35874 Gm37374-201ENSMUST00000194954 1829 ntBASIC20.77■□□□□ 0.92
Slc1a4O35874 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slc1a4O35874 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slc1a4O35874 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Slc1a4O35874 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Slc1a4O35874 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slc1a4O35874 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Slc1a4O35874 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.77■□□□□ 0.92
Slc1a4O35874 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slc1a4O35874 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slc1a4O35874 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slc1a4O35874 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Slc1a4O35874 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Slc1a4O35874 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Slc1a4O35874 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.76■□□□□ 0.91
Slc1a4O35874 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc1a4O35874 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc1a4O35874 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc1a4O35874 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.76■□□□□ 0.91
Slc1a4O35874 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.76■□□□□ 0.91
Slc1a4O35874 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Slc1a4O35874 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc1a4O35874 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Slc1a4O35874 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Slc1a4O35874 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Slc1a4O35874 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc1a4O35874 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc1a4O35874 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Slc1a4O35874 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Slc1a4O35874 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.75■□□□□ 0.91
Slc1a4O35874 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc1a4O35874 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Slc1a4O35874 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc1a4O35874 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc1a4O35874 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc1a4O35874 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Slc1a4O35874 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.75■□□□□ 0.91
Slc1a4O35874 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Slc1a4O35874 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Slc1a4O35874 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Slc1a4O35874 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc1a4O35874 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Slc1a4O35874 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Slc1a4O35874 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Slc1a4O35874 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc1a4O35874 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc1a4O35874 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc1a4O35874 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.75■□□□□ 0.91
Slc1a4O35874 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Slc1a4O35874 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc1a4O35874 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc1a4O35874 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc1a4O35874 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Slc1a4O35874 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc1a4O35874 Gm10418-201ENSMUST00000100943 576 ntBASIC20.74■□□□□ 0.91
Slc1a4O35874 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.74■□□□□ 0.91
Slc1a4O35874 Mir5122-201ENSMUST00000175004 89 ntBASIC20.74■□□□□ 0.91
Slc1a4O35874 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc1a4O35874 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc1a4O35874 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Slc1a4O35874 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.74■□□□□ 0.91
Slc1a4O35874 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc1a4O35874 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc1a4O35874 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Slc1a4O35874 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.74■□□□□ 0.91
Slc1a4O35874 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Slc1a4O35874 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc1a4O35874 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc1a4O35874 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Slc1a4O35874 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Slc1a4O35874 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc1a4O35874 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc1a4O35874 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.73■□□□□ 0.91
Slc1a4O35874 Gm16042-201ENSMUST00000204813 1247 ntBASIC20.73■□□□□ 0.91
Slc1a4O35874 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Slc1a4O35874 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc1a4O35874 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Slc1a4O35874 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.73■□□□□ 0.91
Slc1a4O35874 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.73■□□□□ 0.91
Slc1a4O35874 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.73■□□□□ 0.91
Slc1a4O35874 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc1a4O35874 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Slc1a4O35874 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc1a4O35874 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc1a4O35874 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc1a4O35874 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.72■□□□□ 0.91
Slc1a4O35874 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Slc1a4O35874 Gm37055-201ENSMUST00000191866 133 ntBASIC20.72■□□□□ 0.91
Slc1a4O35874 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc1a4O35874 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc1a4O35874 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc1a4O35874 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc1a4O35874 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc1a4O35874 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc1a4O35874 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Slc1a4O35874 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms