Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Slc1a6O35544 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Slc1a6O35544 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Slc1a6O35544 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Slc1a6O35544 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc1a6O35544 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc1a6O35544 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc1a6O35544 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc1a6O35544 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.48■□□□□ 0.39
Slc1a6O35544 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc1a6O35544 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Slc1a6O35544 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc1a6O35544 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc1a6O35544 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc1a6O35544 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.47■□□□□ 0.39
Slc1a6O35544 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc1a6O35544 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.47■□□□□ 0.39
Slc1a6O35544 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Slc1a6O35544 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Slc1a6O35544 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Slc1a6O35544 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc1a6O35544 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Slc1a6O35544 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc1a6O35544 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc1a6O35544 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc1a6O35544 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.47■□□□□ 0.39
Slc1a6O35544 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc1a6O35544 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc1a6O35544 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.47■□□□□ 0.39
Slc1a6O35544 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Slc1a6O35544 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Slc1a6O35544 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Slc1a6O35544 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Slc1a6O35544 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Slc1a6O35544 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Slc1a6O35544 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Slc1a6O35544 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Slc1a6O35544 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.46■□□□□ 0.39
Slc1a6O35544 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.46■□□□□ 0.39
Slc1a6O35544 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.46■□□□□ 0.39
Slc1a6O35544 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.46■□□□□ 0.39
Slc1a6O35544 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Slc1a6O35544 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Slc1a6O35544 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Slc1a6O35544 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Slc1a6O35544 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Slc1a6O35544 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Slc1a6O35544 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.45■□□□□ 0.38
Slc1a6O35544 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Slc1a6O35544 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Slc1a6O35544 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.45■□□□□ 0.38
Slc1a6O35544 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Slc1a6O35544 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Slc1a6O35544 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.45■□□□□ 0.38
Slc1a6O35544 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Slc1a6O35544 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.45■□□□□ 0.38
Slc1a6O35544 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Slc1a6O35544 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Slc1a6O35544 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Slc1a6O35544 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Slc1a6O35544 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Slc1a6O35544 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Slc1a6O35544 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc1a6O35544 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc1a6O35544 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc1a6O35544 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Slc1a6O35544 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.44■□□□□ 0.38
Slc1a6O35544 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Slc1a6O35544 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc1a6O35544 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc1a6O35544 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Slc1a6O35544 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc1a6O35544 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Slc1a6O35544 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc1a6O35544 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc1a6O35544 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc1a6O35544 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc1a6O35544 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc1a6O35544 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc1a6O35544 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc1a6O35544 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Slc1a6O35544 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Slc1a6O35544 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc1a6O35544 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Slc1a6O35544 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Slc1a6O35544 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Slc1a6O35544 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.43■□□□□ 0.38
Slc1a6O35544 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Slc1a6O35544 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Slc1a6O35544 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Slc1a6O35544 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Slc1a6O35544 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Slc1a6O35544 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Slc1a6O35544 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Slc1a6O35544 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.43■□□□□ 0.38
Slc1a6O35544 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slc1a6O35544 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slc1a6O35544 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Slc1a6O35544 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.42■□□□□ 0.38
Slc1a6O35544 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms