Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Efnb3O35393 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.01□□□□□ -0.17
Efnb3O35393 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Efnb3O35393 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Efnb3O35393 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Efnb3O35393 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Efnb3O35393 CT010467.1-202ENSMUST00000205406 714 ntBASIC14.01□□□□□ -0.17
Efnb3O35393 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC14.01□□□□□ -0.17
Efnb3O35393 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Efnb3O35393 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Efnb3O35393 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC14.01□□□□□ -0.17
Efnb3O35393 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Efnb3O35393 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Efnb3O35393 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.01□□□□□ -0.17
Efnb3O35393 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Efnb3O35393 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Efnb3O35393 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Efnb3O35393 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Efnb3O35393 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Efnb3O35393 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Efnb3O35393 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Efnb3O35393 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Efnb3O35393 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Efnb3O35393 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC14□□□□□ -0.17
Efnb3O35393 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Efnb3O35393 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Efnb3O35393 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14□□□□□ -0.17
Efnb3O35393 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC14□□□□□ -0.17
Efnb3O35393 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC14□□□□□ -0.17
Efnb3O35393 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC14□□□□□ -0.17
Efnb3O35393 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC14□□□□□ -0.17
Efnb3O35393 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Efnb3O35393 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Efnb3O35393 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC14□□□□□ -0.17
Efnb3O35393 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Efnb3O35393 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Efnb3O35393 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14□□□□□ -0.17
Efnb3O35393 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14□□□□□ -0.17
Efnb3O35393 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Efnb3O35393 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14□□□□□ -0.17
Efnb3O35393 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14□□□□□ -0.17
Efnb3O35393 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Efnb3O35393 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Efnb3O35393 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Efnb3O35393 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC13.99□□□□□ -0.17
Efnb3O35393 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Efnb3O35393 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Efnb3O35393 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Efnb3O35393 AC160393.1-201ENSMUST00000218378 1279 ntBASIC13.99□□□□□ -0.17
Efnb3O35393 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC13.99□□□□□ -0.17
Efnb3O35393 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Efnb3O35393 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Efnb3O35393 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Efnb3O35393 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Efnb3O35393 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Efnb3O35393 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Efnb3O35393 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Efnb3O35393 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Efnb3O35393 Idnk-204ENSMUST00000226010 1898 ntBASIC13.98□□□□□ -0.17
Efnb3O35393 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Efnb3O35393 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Efnb3O35393 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Efnb3O35393 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Efnb3O35393 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Efnb3O35393 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Efnb3O35393 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Efnb3O35393 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Efnb3O35393 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Efnb3O35393 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Efnb3O35393 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Efnb3O35393 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Efnb3O35393 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Efnb3O35393 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Efnb3O35393 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Efnb3O35393 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Efnb3O35393 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Efnb3O35393 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Efnb3O35393 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Efnb3O35393 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Efnb3O35393 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Efnb3O35393 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Efnb3O35393 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Efnb3O35393 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Efnb3O35393 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Efnb3O35393 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC13.97□□□□□ -0.17
Efnb3O35393 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Efnb3O35393 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Efnb3O35393 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Efnb3O35393 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Efnb3O35393 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Efnb3O35393 Gm15743-202ENSMUST00000182690 1901 ntBASIC13.97□□□□□ -0.17
Efnb3O35393 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Efnb3O35393 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Efnb3O35393 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Efnb3O35393 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Efnb3O35393 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Efnb3O35393 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Efnb3O35393 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Efnb3O35393 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC13.96□□□□□ -0.17
Efnb3O35393 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms