Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Col15a1O35206 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
Col15a1O35206 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Col15a1O35206 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC22.77■■□□□ 1.24
Col15a1O35206 Gm17807-201ENSMUST00000186869 298 ntBASIC22.77■■□□□ 1.24
Col15a1O35206 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Col15a1O35206 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Col15a1O35206 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Col15a1O35206 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Col15a1O35206 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Col15a1O35206 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC22.77■■□□□ 1.24
Col15a1O35206 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Col15a1O35206 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
Col15a1O35206 AC130713.1-201ENSMUST00000228853 1096 ntBASIC22.76■■□□□ 1.23
Col15a1O35206 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Col15a1O35206 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Col15a1O35206 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
Col15a1O35206 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Col15a1O35206 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Col15a1O35206 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC22.76■■□□□ 1.23
Col15a1O35206 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Col15a1O35206 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Col15a1O35206 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Col15a1O35206 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Col15a1O35206 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Col15a1O35206 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC22.76■■□□□ 1.23
Col15a1O35206 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
Col15a1O35206 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Col15a1O35206 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Col15a1O35206 Gm11355-201ENSMUST00000121120 306 ntBASIC22.76■■□□□ 1.23
Col15a1O35206 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC22.76■■□□□ 1.23
Col15a1O35206 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
Col15a1O35206 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
Col15a1O35206 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Col15a1O35206 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC22.75■■□□□ 1.23
Col15a1O35206 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC22.75■■□□□ 1.23
Col15a1O35206 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Col15a1O35206 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Col15a1O35206 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Col15a1O35206 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Col15a1O35206 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Col15a1O35206 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Col15a1O35206 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC22.75■■□□□ 1.23
Col15a1O35206 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
Col15a1O35206 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
Col15a1O35206 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Col15a1O35206 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Col15a1O35206 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Col15a1O35206 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
Col15a1O35206 Gm37374-201ENSMUST00000194954 1829 ntBASIC22.74■■□□□ 1.23
Col15a1O35206 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Col15a1O35206 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
Col15a1O35206 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
Col15a1O35206 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC22.74■■□□□ 1.23
Col15a1O35206 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Col15a1O35206 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Col15a1O35206 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC22.73■■□□□ 1.23
Col15a1O35206 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Col15a1O35206 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Col15a1O35206 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Col15a1O35206 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC22.73■■□□□ 1.23
Col15a1O35206 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Col15a1O35206 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Col15a1O35206 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Col15a1O35206 Gm18958-201ENSMUST00000174258 762 ntBASIC22.73■■□□□ 1.23
Col15a1O35206 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC22.73■■□□□ 1.23
Col15a1O35206 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Col15a1O35206 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Col15a1O35206 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC22.72■■□□□ 1.23
Col15a1O35206 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Col15a1O35206 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Col15a1O35206 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC22.72■■□□□ 1.23
Col15a1O35206 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Col15a1O35206 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
Col15a1O35206 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
Col15a1O35206 Gm26039-201ENSMUST00000158152 144 ntBASIC22.72■■□□□ 1.23
Col15a1O35206 Gm18669-201ENSMUST00000216049 778 ntBASIC22.72■■□□□ 1.23
Col15a1O35206 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Col15a1O35206 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Col15a1O35206 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Col15a1O35206 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC22.71■■□□□ 1.23
Col15a1O35206 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Col15a1O35206 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Col15a1O35206 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC22.71■■□□□ 1.23
Col15a1O35206 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC22.71■■□□□ 1.23
Col15a1O35206 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Col15a1O35206 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Col15a1O35206 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
Col15a1O35206 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Col15a1O35206 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
Col15a1O35206 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Col15a1O35206 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Col15a1O35206 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
Col15a1O35206 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
Col15a1O35206 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
Col15a1O35206 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Col15a1O35206 Gm11950-201ENSMUST00000121615 838 ntBASIC22.7■■□□□ 1.22
Col15a1O35206 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC22.7■■□□□ 1.22
Col15a1O35206 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC22.7■■□□□ 1.22
Col15a1O35206 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms