Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Cx3cl1O35188 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.61■□□□□ 0.25
Cx3cl1O35188 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cx3cl1O35188 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cx3cl1O35188 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Cx3cl1O35188 Gm15375-201ENSMUST00000119510 849 ntBASIC16.61■□□□□ 0.25
Cx3cl1O35188 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cx3cl1O35188 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cx3cl1O35188 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.61■□□□□ 0.25
Cx3cl1O35188 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cx3cl1O35188 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cx3cl1O35188 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cx3cl1O35188 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cx3cl1O35188 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cx3cl1O35188 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cx3cl1O35188 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cx3cl1O35188 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cx3cl1O35188 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Cx3cl1O35188 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Cx3cl1O35188 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cx3cl1O35188 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.6■□□□□ 0.25
Cx3cl1O35188 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.6■□□□□ 0.25
Cx3cl1O35188 Mir6349-201ENSMUST00000184059 97 ntBASIC16.6■□□□□ 0.25
Cx3cl1O35188 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.6■□□□□ 0.25
Cx3cl1O35188 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cx3cl1O35188 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.6■□□□□ 0.25
Cx3cl1O35188 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cx3cl1O35188 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.6■□□□□ 0.25
Cx3cl1O35188 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cx3cl1O35188 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cx3cl1O35188 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cx3cl1O35188 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cx3cl1O35188 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cx3cl1O35188 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cx3cl1O35188 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Cx3cl1O35188 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
Cx3cl1O35188 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cx3cl1O35188 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cx3cl1O35188 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Cx3cl1O35188 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cx3cl1O35188 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cx3cl1O35188 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cx3cl1O35188 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cx3cl1O35188 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cx3cl1O35188 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cx3cl1O35188 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Cx3cl1O35188 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.58■□□□□ 0.24
Cx3cl1O35188 Gm15378-201ENSMUST00000121894 207 ntBASIC16.58■□□□□ 0.24
Cx3cl1O35188 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cx3cl1O35188 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.58■□□□□ 0.24
Cx3cl1O35188 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cx3cl1O35188 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.58■□□□□ 0.24
Cx3cl1O35188 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cx3cl1O35188 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cx3cl1O35188 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cx3cl1O35188 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cx3cl1O35188 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cx3cl1O35188 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cx3cl1O35188 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.57■□□□□ 0.24
Cx3cl1O35188 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cx3cl1O35188 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cx3cl1O35188 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cx3cl1O35188 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.57■□□□□ 0.24
Cx3cl1O35188 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cx3cl1O35188 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cx3cl1O35188 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
Cx3cl1O35188 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Cx3cl1O35188 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.57■□□□□ 0.24
Cx3cl1O35188 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cx3cl1O35188 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.57■□□□□ 0.24
Cx3cl1O35188 Gm10698-201ENSMUST00000182663 604 ntBASIC16.57■□□□□ 0.24
Cx3cl1O35188 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Cx3cl1O35188 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cx3cl1O35188 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cx3cl1O35188 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cx3cl1O35188 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.57■□□□□ 0.24
Cx3cl1O35188 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Cx3cl1O35188 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.57■□□□□ 0.24
Cx3cl1O35188 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cx3cl1O35188 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cx3cl1O35188 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cx3cl1O35188 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cx3cl1O35188 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cx3cl1O35188 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Cx3cl1O35188 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Cx3cl1O35188 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Cx3cl1O35188 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.56■□□□□ 0.24
Cx3cl1O35188 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.56■□□□□ 0.24
Cx3cl1O35188 Mir2861-201ENSMUST00000175539 82 ntBASIC16.56■□□□□ 0.24
Cx3cl1O35188 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cx3cl1O35188 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.56■□□□□ 0.24
Cx3cl1O35188 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cx3cl1O35188 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cx3cl1O35188 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cx3cl1O35188 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cx3cl1O35188 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cx3cl1O35188 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cx3cl1O35188 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.56■□□□□ 0.24
Cx3cl1O35188 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Cx3cl1O35188 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms