Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ndufb11O09111 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ndufb11O09111 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ndufb11O09111 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ndufb11O09111 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.25□□□□□ -0.13
Ndufb11O09111 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ndufb11O09111 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ndufb11O09111 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ndufb11O09111 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.24□□□□□ -0.13
Ndufb11O09111 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ndufb11O09111 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ndufb11O09111 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ndufb11O09111 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ndufb11O09111 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Ndufb11O09111 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ndufb11O09111 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ndufb11O09111 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Ndufb11O09111 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ndufb11O09111 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC14.24□□□□□ -0.13
Ndufb11O09111 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ndufb11O09111 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ndufb11O09111 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ndufb11O09111 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ndufb11O09111 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ndufb11O09111 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ndufb11O09111 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ndufb11O09111 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ndufb11O09111 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Ndufb11O09111 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.24□□□□□ -0.13
Ndufb11O09111 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ndufb11O09111 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ndufb11O09111 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ndufb11O09111 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ndufb11O09111 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ndufb11O09111 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ndufb11O09111 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ndufb11O09111 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ndufb11O09111 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ndufb11O09111 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ndufb11O09111 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ndufb11O09111 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ndufb11O09111 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
Ndufb11O09111 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ndufb11O09111 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ndufb11O09111 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ndufb11O09111 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ndufb11O09111 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ndufb11O09111 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ndufb11O09111 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ndufb11O09111 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ndufb11O09111 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Ndufb11O09111 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ndufb11O09111 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ndufb11O09111 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ndufb11O09111 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ndufb11O09111 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ndufb11O09111 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.22□□□□□ -0.13
Ndufb11O09111 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.22□□□□□ -0.13
Ndufb11O09111 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ndufb11O09111 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ndufb11O09111 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC14.22□□□□□ -0.13
Ndufb11O09111 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ndufb11O09111 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ndufb11O09111 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ndufb11O09111 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ndufb11O09111 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ndufb11O09111 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ndufb11O09111 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ndufb11O09111 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ndufb11O09111 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ndufb11O09111 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ndufb11O09111 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Ndufb11O09111 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ndufb11O09111 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ndufb11O09111 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ndufb11O09111 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Ndufb11O09111 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ndufb11O09111 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Ndufb11O09111 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ndufb11O09111 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Ndufb11O09111 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Ndufb11O09111 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ndufb11O09111 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Ndufb11O09111 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.21□□□□□ -0.13
Ndufb11O09111 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ndufb11O09111 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ndufb11O09111 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ndufb11O09111 Gm14523-201ENSMUST00000117260 558 ntBASIC14.21□□□□□ -0.13
Ndufb11O09111 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Ndufb11O09111 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ndufb11O09111 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ndufb11O09111 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ndufb11O09111 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Ndufb11O09111 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ndufb11O09111 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.21□□□□□ -0.14
Ndufb11O09111 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ndufb11O09111 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ndufb11O09111 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ndufb11O09111 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ndufb11O09111 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms