Protein–RNA interactions for Protein: O08785

Clock, Circadian locomoter output cycles protein kaput, mousemouse

Predictions only

Length 855 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClockO08785 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ClockO08785 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ClockO08785 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ClockO08785 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
ClockO08785 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ClockO08785 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
ClockO08785 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
ClockO08785 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
ClockO08785 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ClockO08785 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
ClockO08785 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
ClockO08785 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
ClockO08785 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ClockO08785 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ClockO08785 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ClockO08785 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ClockO08785 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ClockO08785 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ClockO08785 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.83■□□□□ 0.28
ClockO08785 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ClockO08785 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ClockO08785 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ClockO08785 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ClockO08785 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ClockO08785 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ClockO08785 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ClockO08785 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
ClockO08785 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ClockO08785 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.82■□□□□ 0.28
ClockO08785 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ClockO08785 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ClockO08785 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ClockO08785 Gm8493-201ENSMUST00000196881 489 ntBASIC16.82■□□□□ 0.28
ClockO08785 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
ClockO08785 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ClockO08785 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ClockO08785 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ClockO08785 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ClockO08785 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ClockO08785 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ClockO08785 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ClockO08785 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.82■□□□□ 0.28
ClockO08785 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ClockO08785 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.81■□□□□ 0.28
ClockO08785 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ClockO08785 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ClockO08785 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
ClockO08785 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ClockO08785 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ClockO08785 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ClockO08785 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ClockO08785 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ClockO08785 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
ClockO08785 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
ClockO08785 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.81■□□□□ 0.28
ClockO08785 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ClockO08785 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ClockO08785 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ClockO08785 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ClockO08785 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ClockO08785 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ClockO08785 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
ClockO08785 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ClockO08785 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ClockO08785 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ClockO08785 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ClockO08785 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
ClockO08785 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ClockO08785 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ClockO08785 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ClockO08785 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ClockO08785 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ClockO08785 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ClockO08785 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
ClockO08785 Gm27454-201ENSMUST00000185090 204 ntBASIC16.8■□□□□ 0.28
ClockO08785 Gm43173-201ENSMUST00000202246 593 ntBASIC16.8■□□□□ 0.28
ClockO08785 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ClockO08785 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ClockO08785 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
ClockO08785 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ClockO08785 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ClockO08785 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
ClockO08785 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ClockO08785 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ClockO08785 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.8■□□□□ 0.28
ClockO08785 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ClockO08785 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.79■□□□□ 0.28
ClockO08785 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.79■□□□□ 0.28
ClockO08785 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ClockO08785 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ClockO08785 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ClockO08785 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ClockO08785 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.79■□□□□ 0.28
ClockO08785 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ClockO08785 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ClockO08785 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ClockO08785 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ClockO08785 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ClockO08785 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ClockO08785 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms