Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tnfrsf11bO08712 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.99■□□□□ 0.47
Tnfrsf11bO08712 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tnfrsf11bO08712 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tnfrsf11bO08712 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tnfrsf11bO08712 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tnfrsf11bO08712 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tnfrsf11bO08712 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tnfrsf11bO08712 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tnfrsf11bO08712 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tnfrsf11bO08712 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tnfrsf11bO08712 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.99■□□□□ 0.47
Tnfrsf11bO08712 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
Tnfrsf11bO08712 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.99■□□□□ 0.47
Tnfrsf11bO08712 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.99■□□□□ 0.47
Tnfrsf11bO08712 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
Tnfrsf11bO08712 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Tnfrsf11bO08712 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.99■□□□□ 0.47
Tnfrsf11bO08712 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.99■□□□□ 0.47
Tnfrsf11bO08712 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Tnfrsf11bO08712 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tnfrsf11bO08712 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tnfrsf11bO08712 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tnfrsf11bO08712 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.99■□□□□ 0.47
Tnfrsf11bO08712 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.98■□□□□ 0.47
Tnfrsf11bO08712 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfrsf11bO08712 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfrsf11bO08712 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfrsf11bO08712 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfrsf11bO08712 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfrsf11bO08712 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfrsf11bO08712 Mir5133-201ENSMUST00000174955 77 ntBASIC17.98■□□□□ 0.47
Tnfrsf11bO08712 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfrsf11bO08712 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Tnfrsf11bO08712 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfrsf11bO08712 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfrsf11bO08712 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfrsf11bO08712 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfrsf11bO08712 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfrsf11bO08712 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfrsf11bO08712 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfrsf11bO08712 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Tnfrsf11bO08712 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.97■□□□□ 0.47
Tnfrsf11bO08712 Flg-201ENSMUST00000050758 1488 ntBASIC17.97■□□□□ 0.47
Tnfrsf11bO08712 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfrsf11bO08712 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfrsf11bO08712 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Tnfrsf11bO08712 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfrsf11bO08712 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Tnfrsf11bO08712 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.97■□□□□ 0.47
Tnfrsf11bO08712 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfrsf11bO08712 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.97■□□□□ 0.47
Tnfrsf11bO08712 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfrsf11bO08712 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfrsf11bO08712 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfrsf11bO08712 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfrsf11bO08712 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.96■□□□□ 0.47
Tnfrsf11bO08712 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tnfrsf11bO08712 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Tnfrsf11bO08712 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tnfrsf11bO08712 Gm29791-202ENSMUST00000207888 369 ntBASIC17.96■□□□□ 0.47
Tnfrsf11bO08712 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Tnfrsf11bO08712 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.96■□□□□ 0.47
Tnfrsf11bO08712 Rab3c-203ENSMUST00000224180 967 ntBASIC17.96■□□□□ 0.47
Tnfrsf11bO08712 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tnfrsf11bO08712 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tnfrsf11bO08712 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tnfrsf11bO08712 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tnfrsf11bO08712 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tnfrsf11bO08712 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tnfrsf11bO08712 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tnfrsf11bO08712 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.96■□□□□ 0.47
Tnfrsf11bO08712 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.96■□□□□ 0.46
Tnfrsf11bO08712 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
Tnfrsf11bO08712 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.96■□□□□ 0.46
Tnfrsf11bO08712 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Tnfrsf11bO08712 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfrsf11bO08712 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfrsf11bO08712 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfrsf11bO08712 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfrsf11bO08712 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfrsf11bO08712 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfrsf11bO08712 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfrsf11bO08712 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfrsf11bO08712 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfrsf11bO08712 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfrsf11bO08712 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfrsf11bO08712 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfrsf11bO08712 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.95■□□□□ 0.46
Tnfrsf11bO08712 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfrsf11bO08712 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfrsf11bO08712 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Tnfrsf11bO08712 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Tnfrsf11bO08712 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tnfrsf11bO08712 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tnfrsf11bO08712 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.94■□□□□ 0.46
Tnfrsf11bO08712 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tnfrsf11bO08712 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tnfrsf11bO08712 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tnfrsf11bO08712 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms