Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Raet1bO08603 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Raet1bO08603 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Raet1bO08603 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Raet1bO08603 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Raet1bO08603 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Raet1bO08603 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Raet1bO08603 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Raet1bO08603 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Raet1bO08603 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Raet1bO08603 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC15.69■□□□□ 0.1
Raet1bO08603 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Raet1bO08603 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.69■□□□□ 0.1
Raet1bO08603 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Raet1bO08603 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Raet1bO08603 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Raet1bO08603 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Raet1bO08603 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Raet1bO08603 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Raet1bO08603 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Raet1bO08603 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
Raet1bO08603 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.69■□□□□ 0.1
Raet1bO08603 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Raet1bO08603 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Raet1bO08603 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Raet1bO08603 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Raet1bO08603 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.68■□□□□ 0.1
Raet1bO08603 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Raet1bO08603 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.68■□□□□ 0.1
Raet1bO08603 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Raet1bO08603 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC15.68■□□□□ 0.1
Raet1bO08603 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Raet1bO08603 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Raet1bO08603 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Raet1bO08603 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Raet1bO08603 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Raet1bO08603 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.67■□□□□ 0.1
Raet1bO08603 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Raet1bO08603 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Raet1bO08603 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Raet1bO08603 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.67■□□□□ 0.1
Raet1bO08603 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Raet1bO08603 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Raet1bO08603 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Raet1bO08603 Gm12441-201ENSMUST00000121806 588 ntBASIC15.67■□□□□ 0.1
Raet1bO08603 Mir2861-201ENSMUST00000175539 82 ntBASIC15.67■□□□□ 0.1
Raet1bO08603 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Raet1bO08603 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Raet1bO08603 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Raet1bO08603 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.67■□□□□ 0.1
Raet1bO08603 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Raet1bO08603 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Raet1bO08603 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Raet1bO08603 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.67■□□□□ 0.1
Raet1bO08603 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Raet1bO08603 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Raet1bO08603 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Raet1bO08603 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Raet1bO08603 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.66■□□□□ 0.1
Raet1bO08603 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Raet1bO08603 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Raet1bO08603 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Raet1bO08603 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Raet1bO08603 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Raet1bO08603 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.66■□□□□ 0.1
Raet1bO08603 Gm29791-202ENSMUST00000207888 369 ntBASIC15.66■□□□□ 0.1
Raet1bO08603 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC15.66■□□□□ 0.1
Raet1bO08603 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Raet1bO08603 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Raet1bO08603 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Raet1bO08603 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Raet1bO08603 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.66■□□□□ 0.1
Raet1bO08603 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC15.66■□□□□ 0.1
Raet1bO08603 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.66■□□□□ 0.1
Raet1bO08603 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Raet1bO08603 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Raet1bO08603 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Raet1bO08603 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Raet1bO08603 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Raet1bO08603 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.65■□□□□ 0.1
Raet1bO08603 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Raet1bO08603 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Raet1bO08603 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Raet1bO08603 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Raet1bO08603 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Raet1bO08603 Gm11249-201ENSMUST00000117071 859 ntBASIC15.65■□□□□ 0.1
Raet1bO08603 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Raet1bO08603 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Raet1bO08603 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC15.65■□□□□ 0.1
Raet1bO08603 Gm8969-201ENSMUST00000199694 526 ntBASIC15.65■□□□□ 0.1
Raet1bO08603 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Raet1bO08603 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Raet1bO08603 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Raet1bO08603 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Raet1bO08603 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Raet1bO08603 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Raet1bO08603 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Raet1bO08603 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Raet1bO08603 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Raet1bO08603 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms